Gene Slin_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3160 
Symbol 
ID8726913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3830892 
End bp3831452 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content48% 
IMG OID 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_003387970 
Protein GI284038040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCT TACTCGTTGG TCTGGGCAAT ATCGGCCCTG AATATGCACT GACCCGCCAC 
AATGCGGGCT TTATGGTTCT CGACCGTCTG GCTGCCCAGA ATGACTTCAG CTTTTCCATG
ACTCGCCTGG CTTACACGGC CAAATGGCAG CATAAAGGCA AGCAGTTGTT TTTTGTAAAG
CCAACCACCT ACATGAATTT GAGCGGCAAG GCAGTTTCCT ACTACATGAA GCAGGAAAAT
ATCCCCATCG AGAATATCCT GATTATCACC GACGATAAAG ATTTACCCTT TGGCAAACTA
CGGTTAAAGC CGAAAGGATC GCCTGGCGGG CATAATGGCT TGAAGAATAT CGACGACATT
TTAGGGACGC AGGAATACGC CCGGCTTCGG GTTGGTATTG GCAACAATTT CTCGAAAGGA
CGGCAGGTCG ATTTTGTGCT GGGGCAGTTT CCGGAGGACG AACTGATCCA ATTACCGGAC
TATTTGGACC GGGCAGGTGG CGCAGCCCTC AGTTTTTGTA CTATGGGCAT ACAAATGGCC
ATGAATAATT ACAACCAATG A
 
Protein sequence
MKFLLVGLGN IGPEYALTRH NAGFMVLDRL AAQNDFSFSM TRLAYTAKWQ HKGKQLFFVK 
PTTYMNLSGK AVSYYMKQEN IPIENILIIT DDKDLPFGKL RLKPKGSPGG HNGLKNIDDI
LGTQEYARLR VGIGNNFSKG RQVDFVLGQF PEDELIQLPD YLDRAGGAAL SFCTMGIQMA
MNNYNQ