Gene Slin_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3126 
Symbol 
ID8726879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3795690 
End bp3796223 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content39% 
IMG OID 
Productprotein of unknown function DUF1568 
Protein accessionYP_003387936 
Protein GI284038006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACTT ATTGTCAGGA GTACTTCCCA CCCTTACTTG AAGACTGTTT TTACCACATC 
TACAATCGGG GCAACAACGG CGATAACTTA TTTTTTCAGC ATAGGAATTA TCAGTATTTT
CTACAAAAGT ACGATCATTA TTTAAGCCTT TATCTCGAAA CCTATTCCTT CTGTTTACTA
CCCAATCACT TTCATCTGTT AGTTCGAATC AAAAATTTTG CTGAACTACC CAAAATAGAA
CAAACATTAC GACATGGTGC CGAATTTATA ACGTCGCCTG AACGAATTAT TAGTGAGCAA
TTCAGGCGCT TCTTCGTATC CTATGCCAAA TCAATTAAAG TACAGGAAGA ACGAACAGGA
AGCCTGTTTG AGAAGAACTT TAGACGGAAA CAAGTGGATT CAGAAGACTA TTTTACAACC
TTGATTGCAT ACATCCATCG TAATCCGCAA ACACATGGTA TTTGCCCTCC TACAACCCAC
TTAATCCCGC CCTCGCTTTA TTGTCAACGC TGTTTTTGTA CTCATGGCGT TTAA
 
Protein sequence
MSTYCQEYFP PLLEDCFYHI YNRGNNGDNL FFQHRNYQYF LQKYDHYLSL YLETYSFCLL 
PNHFHLLVRI KNFAELPKIE QTLRHGAEFI TSPERIISEQ FRRFFVSYAK SIKVQEERTG
SLFEKNFRRK QVDSEDYFTT LIAYIHRNPQ THGICPPTTH LIPPSLYCQR CFCTHGV