Gene Slin_3124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3124 
Symbol 
ID8726877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3793385 
End bp3794140 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content51% 
IMG OID 
Productprotein of unknown function DUF164 
Protein accessionYP_003387934 
Protein GI284038004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA CGATTGCGCA AAAACTAGAC GCTCTTCTCA AACTGCAATC CCTGGATTCT 
CAACTAGACG AACTCATCAA AATTCGCGGT GGTCTGCCCG AAGAAGTCCG TGACCTTGAA
GACGATATAG CAGGTTTTGA AACCCGGATT GGGAAATTCC AGGCCGAAAT CAAAACGCTG
GAGGAAGAAA TTGAGCGCAA TCGCGTGGCC AAAAAGGACG CTGAAAAGCT GATCACCAAA
TACAAGGATC AGCAGATGAA CGTTCGCAAC AACCGCGAGT TTGACGCCAT TTCGAAAGAA
ATCGAGTTGC AGTCCCTTGA GATTGAATTG GTCGAAAAAC GGGCCAACGA AGCTCAATTC
CGGGTACGGG GCAAGGAAGA GGAGATCAAA ACGACCACAG CGGCTCTGAA CGAACGGAAA
GAAGACCTGA AAGCCAAAAA GCAGGAACTC GACCAAATTA CGTCGGAAAG CCAGGAAGAA
GAGAAGGAAC TCATCAAACA GCGCGATGAG CAGGCAACGA CCATCGAGGC CCGTCTGTTG
AACTCCTACA AAAAAATTCG CGGTAACGCC CTCAATGGTC TGGCCGTTGT GATGGTGAAA
CGGGGAGCCT GCGGAGGTTG CTTTAACGTA GTTCCGCCCC AGCGCCAGGC TGACATCAAA
GACAAGAAGA AAATCATCGT TTGCGAACAC TGCGGACGGA TTTTCGCCGA TGTGGAAGGT
GTTCCCGAGC CAGCACCAAC GGGCCGTGGC CGGTAG
 
Protein sequence
MELTIAQKLD ALLKLQSLDS QLDELIKIRG GLPEEVRDLE DDIAGFETRI GKFQAEIKTL 
EEEIERNRVA KKDAEKLITK YKDQQMNVRN NREFDAISKE IELQSLEIEL VEKRANEAQF
RVRGKEEEIK TTTAALNERK EDLKAKKQEL DQITSESQEE EKELIKQRDE QATTIEARLL
NSYKKIRGNA LNGLAVVMVK RGACGGCFNV VPPQRQADIK DKKKIIVCEH CGRIFADVEG
VPEPAPTGRG R