| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3123 |
|---|
| Symbol | |
|---|
| ID | 8726876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3792267 |
|---|
| End bp | 3793367 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF34 |
|---|
| Protein accession | YP_003387933 |
|---|
| Protein GI | 284038003 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACAAA TCCGTCAGCT CGCGGCCCAT ATTGAAGCGC TGGCCCCCCT CGCCTATCAG
GAATCGTACG ACAACGTGGG GCTACTCGTA GGCGACCCCA CCACCGATAT AAAAGGCGTT
TTGGTAACGC TCGATGTAAC CGAAGCAGTT GTCGACGAAG CTATTGCCAA AGGGTGCAAC
GTCATTGTAG CGCATCACCC GGTTGTGTTT AAGGGCTTGA AAAAGCTGAA CGGAAAAACG
TATGTGGAAC GTACCGTTAT CAAAGCCATC AGGAATGACA TAGCCATTTA TGCGGCTCAC
ACCAATCTGG ATAACGTGGC GGGGGGCGTT AACTTTAAAA TCGCGGAGAA ACTAAAACTG
ACGAACGTAC AGATTCTGGC ACCTAAAACG CAGGTTCTGA GCAAGCTGGT TACATTCGTC
CCTATAAACG ACACCCAGCG GGTACTGGAT GCACTCTATG CAGCCGGAGC GGGCCAGATC
GGTGATTACA AAAACTGTAG TTTCCGGGTT AGCGGTACCG GTACATTCCA GCCGGGCGAG
AATGCCCAGC CCGTCATTGG CGATATAGGC GAGTATCATG AAGAGCCCGA AAATCGGATT
GAGGTTATCA TTCCGACCCA TCAACAGAGA CAGGTATTGA CCGCCCTCCG GCAGGTACAT
CGCTATGACG AGGTGGCCTA TTACCTGACG CCGTTGGATA ATCAGCATCA GGAGGTCGGT
TCAGGAGCCG TGGGCGATTT GCCGGAGCCG CTGACAGGAA CGGCCTGGCT GTCTTATTTA
AAAGAACACA TGAGTCTGAA CCTGATCCGG TACACGGCCC TCCCCGACCG GCCGATCCGC
CGAATCGCCG TTTGCGGGGG TGTTGGCAGC TTTTTACTAC CCGACGCCAT CCGGGCGGGC
GCTGATGTGT TTGTGACGGC GGATTACAAG TATCACGAAT TCTTTGATGC CGAAGGACGC
ATAAGTATCT GCGATATTGG GCATTACGAA AGTGAAGTCT ATACGAAAGA CTTGATTTGC
GGGCATTTGG CAAAAAAATT CACTACTTTT GCGGTAATTT TATCAGAAAC GGATACGAAT
CCGGTTCGGT ACTTCATATA G
|
|---|
| Protein sequence | MPQIRQLAAH IEALAPLAYQ ESYDNVGLLV GDPTTDIKGV LVTLDVTEAV VDEAIAKGCN
VIVAHHPVVF KGLKKLNGKT YVERTVIKAI RNDIAIYAAH TNLDNVAGGV NFKIAEKLKL
TNVQILAPKT QVLSKLVTFV PINDTQRVLD ALYAAGAGQI GDYKNCSFRV SGTGTFQPGE
NAQPVIGDIG EYHEEPENRI EVIIPTHQQR QVLTALRQVH RYDEVAYYLT PLDNQHQEVG
SGAVGDLPEP LTGTAWLSYL KEHMSLNLIR YTALPDRPIR RIAVCGGVGS FLLPDAIRAG
ADVFVTADYK YHEFFDAEGR ISICDIGHYE SEVYTKDLIC GHLAKKFTTF AVILSETDTN
PVRYFI
|
|---|
| |