| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3114 |
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| Symbol | |
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| ID | 8726867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3781640 |
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| End bp | 3783379 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003387924 |
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| Protein GI | 284037994 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAC TTTTGATTCT ACTGAGCTTC GGTATCTTTT TGTCCTGCCA GTCAAACTCT
TCTGAATCAA AAGAAGATAA AGCCCCGCCA GTAGCGGTAC CAACCGATTT TATTGAGGAG
CTGTGGTATA AGAACAGCCT TATTTATAAT GTCGACGTGG AAGTGTTTAA AGACTCGGAC
GGAAACGGGT ACGGCGATTT TAAAGGCCTG ACGCAGGAGC TGGATTACCT GAAAGGGTTG
GGCGTGCAAA CCATCTGGCT AGCCCCCTTT CAGCCCACGC CTAATAAGGA TGATGGGTAC
GATGTTTCGG ATTTCTATGG TATCGACACG CACCTGGGCA CAACGCAGGA TTTTGATGAG
TGTGTGCGGC AAGCCAATCT GCGGGGTATT CGAGTAATTA TGGACCTGGT TACAAACCAC
ACGTCCGACC AGCATCCGTG GTTTCAGCAG GCCCGGCAGC GGAAAGATTC ACCCTACCGG
TCGTGGTACG TATGGTCGAA AGAGCGACCC GAAAAGTGGG ATTCCGGCAT GGTGTTTCCC
GGTGTGCAGA AAGCCGTCTG GACGTTCGAC AAACAGGCAG GCGAGTATTA TTACCACCGC
TTTTATGACT TTCAGCCCGA CCTCAATATG CAGAATCCGG CTGTGGTACA GGAGATGCGG
AAAATCATCC GCTATTGGCT CGACAAAGGC ATTGCGGGTT TTCGGGTAGA CGCTGTTCCG
TTTCTGATTG AGGTGGCCAA CCCCGGCTTC GACCCCGACA AGCCCCAGCA CCAGTTCGAC
ATGATCACCC AACTGCATCA GTACGTACAG TGGCACAAAC GGGATGCCAT TTTGCTGGGC
GAAGCCAATG TTGATCCAAA AGAGCAGGAG CCTTATTTTG GTAAACAAGG TGAGGGAATT
CATACCATGT TCAACTTCTT TGCCAACCAG CACCTGTTCT ATGCCCTGGC AACCTCGGAT
ACAAAGTCGC TGAAGAAGGC GTTGATCGAT ACCAAAAACA TACCCGCAAC GTCGCAATGG
GCGCATTTCC TCCGAAACCA CGACGAAATC GATCTCGGCA GGCTCAGCGA TGAAGAGCGG
AAGAAGGTTT ACGCCAAATT CGGGCCCGAC GCCAACATGC AGCTTTACGA CCGGGGCATT
CGTCGGCGGC TGGCCCCCAT GCTGGCTGAT CCGCGTCTGG TCGAACTGGC CTATAGCGTG
TTGTTTTCGC TGCCCGGCAT GCCGGTTATC CGATACGGCG AGGAAATCGG TATGGGCGAT
GACCTGCGGC TGAACGAGCG GCTTTCCATC CGGACACCCA TGCAGTGGTC GACCGGTACC
AATGCGGGTT TTTCGGAGGG CACCAAACTG GTACGACCCG TTATCAGCGA CGGGCCATAT
CGCTATAGCC GGGTCAATGT GGCTGCTCAA CGGGCCGATT CGGCATCGCT CCTCAACCGG
GTAACCCGCT TCGCCCGTTT GCGCAGAGAG TGCCCGGAAA TAGGCTGGGG AACCTGGGAA
CTCCTCGACA CGGGTTCGGA AAACGTGCTG GCTATCCGGT ATGACTGGCA GGGACGTTCG
CTGCTGATGG TTCACAACTT CAGCGCTGCC CCGAAATCTT GTACGCTAAA GCCATCCCAA
AAGACCAAAG GGTCTGCCCG TAACCTGTTG AGTAAGAAAG TTGAACAGCT GGATCAGCAG
GGTAACATTA CCATTCCGTT GGCGGGCTAT GGGTATAGCT GGTACCGACT GACTAACTGA
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| Protein sequence | MKQLLILLSF GIFLSCQSNS SESKEDKAPP VAVPTDFIEE LWYKNSLIYN VDVEVFKDSD
GNGYGDFKGL TQELDYLKGL GVQTIWLAPF QPTPNKDDGY DVSDFYGIDT HLGTTQDFDE
CVRQANLRGI RVIMDLVTNH TSDQHPWFQQ ARQRKDSPYR SWYVWSKERP EKWDSGMVFP
GVQKAVWTFD KQAGEYYYHR FYDFQPDLNM QNPAVVQEMR KIIRYWLDKG IAGFRVDAVP
FLIEVANPGF DPDKPQHQFD MITQLHQYVQ WHKRDAILLG EANVDPKEQE PYFGKQGEGI
HTMFNFFANQ HLFYALATSD TKSLKKALID TKNIPATSQW AHFLRNHDEI DLGRLSDEER
KKVYAKFGPD ANMQLYDRGI RRRLAPMLAD PRLVELAYSV LFSLPGMPVI RYGEEIGMGD
DLRLNERLSI RTPMQWSTGT NAGFSEGTKL VRPVISDGPY RYSRVNVAAQ RADSASLLNR
VTRFARLRRE CPEIGWGTWE LLDTGSENVL AIRYDWQGRS LLMVHNFSAA PKSCTLKPSQ
KTKGSARNLL SKKVEQLDQQ GNITIPLAGY GYSWYRLTN
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