| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3104 |
|---|
| Symbol | |
|---|
| ID | 8726857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3767793 |
|---|
| End bp | 3768611 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_003387914 |
|---|
| Protein GI | 284037984 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTA TAAACCCAGC CCTTGAGCGC CCGGAATTAA TCGCCTACTT TTTAGGTGCC
AATAATTACA GTTGGCTTCA CTTCAGAAAT GGAGAAAAGA AACTGCTGTC AAAGCCGATC
AGCTACCTGG AGGGCCGGCT GCCGGGATTT ATTCGGGTCC ACAAAACGGC CCTGATCAAT
CCCGACTATG TACAAAGCTT ACACCGCCCG CTACGCCAGA AAATGGCAGG CAAAATTCAG
CTCCAGAGCG GAGAAACATT CCCCGTAAGC CGTCGTCGGT GGAATCAGGT AGCCCAGTCG
CTGGGCGAAC ATCTGTCGCC CGGCAACAAC GAGGAACCAC TACAGGAGTC GGTGTACCTG
GATGATGCGC GTCCGACAAG CGAACAAAGC AACTTAGGGC GTTCGGTAGC ATCGCTGTTT
CTGGTGACCA GCGATGAGCA AAATGCGTTT CTGGCCCGGC AGGTCATTAC GAAAAACTGG
CCTGATTATA GGGTCGAGAC GATACCGAAA AGCATTCATT TGCCGGAGCT GCTCGATGAC
CTGGCGCAGT CGGAACTACC CGTTCTGGTA TTTCTGGATG CCCGATCCGA TACCCTGGAG
CGATTGCAGA CCCTGCAACG GTTAAAAAAC GACCCGCGTT TGTGCCGGGT GCCCGTTGTG
TTGCTGGCAT TGCCAACCGA TAAGTCGGTC ATTGAAGGCT ATGAACGGCA GGCCAACTCC
GTAATCACGA TGAAGGAAGG TGATATGGCG TTCGCGCAGG TCATTGACCG CATCTGTCAG
TTCTGGCTGA AAATTGCGGA ACTGCCCGCC CATTGCTAA
|
|---|
| Protein sequence | MSIINPALER PELIAYFLGA NNYSWLHFRN GEKKLLSKPI SYLEGRLPGF IRVHKTALIN
PDYVQSLHRP LRQKMAGKIQ LQSGETFPVS RRRWNQVAQS LGEHLSPGNN EEPLQESVYL
DDARPTSEQS NLGRSVASLF LVTSDEQNAF LARQVITKNW PDYRVETIPK SIHLPELLDD
LAQSELPVLV FLDARSDTLE RLQTLQRLKN DPRLCRVPVV LLALPTDKSV IEGYERQANS
VITMKEGDMA FAQVIDRICQ FWLKIAELPA HC
|
|---|
| |