Gene Slin_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3082 
Symbol 
ID8726834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3736629 
End bp3737777 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387892 
Protein GI284037962 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.247838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTT TATCGTTTTT AGTGCTCCTG TTTATTTCTA CCCTTTCGCT GGCGCAACAG 
ACGGGCGGCC CGGCACGCTG GTCGGCGGCC AAAGCGAATG CCTGGTACGC CAGGGAACCC
TTTCTGGTGG GTGCCAACTA CGCACCAGCC AATGCCATCA ATGAACTGGA GATGTTTCAG
GCCGAAACCT TCGATCCGGC CACTATTGAC AAAGAATTGG CCATGGCCGA AAGCATTGGT
ATGAATACCA TGCGGGTTTT CCTGCATGAC CTGCTTTGGC AGGACCCCGC CGGGTTCACC
AAACGGCTCG ATCAGTTTCT GACCATTTGC GCCAAACATA AGATCAGGCC AATGCTTGTC
TTGTTTGACT CGTGCTGGGA CCCAAACCCC AAACTTGGCA AGCAGCGTGA ACCAACACCT
GGTATTCACA ATTCGGGATG GGTACAAAGC CCTGGAGCCG ACGCCCTAAC GGATGTATCG
CAATATCCAC GCCTGGAAGC GTATGTAAAA GGAGTAGTTG GTGCCTTTAA GAAGGACAAG
CGAATACTGG CCTGGGACGT CTGGAATGAG CCCGACAACA CCAACGACAA CAGCTATGGC
CAGAACCACA CCCTGAAAAC AGAGGTGCCC AAGCCTCGAA AGATAGCCAT CGTAACGAGC
CTGCTGCCAC ACGTTTTCGA ATGGGCCAGG GCAGCAGGTG CCACACAACC CTTAACATCG
GGCATCTGGG TGTACCGCAC ACCGGAAGAA TGGCAAAACC CGGCCAAATG GACACCCATG
GAGAAAGTGC AGATGGAAAA CTCAGACATT ATTACCTTTC ACCAGTACTC CAACCCTGAA
ACGTTGGAAA AGACGATTCC TGCCATGCTT TCATTTGGCC GTCCGGTCAT CTGCACCGAA
TACATGGCAC GTGGCGTAGC CAGCAAATTT CAAACACACC TGCCCATAGC GAAAAAAGCT
AAAGTTGGTA TGATCAACTG GGGTTTTGTA GCCGGAAAAA CACAAACATT CATACCGTGG
GATAGCTGGC AGAAGCCCTA CGTGAACGGC CGCGAACCGG CAGTCTGGTT CCACGAAGTA
TTTAAGCAGG ATGGAACACC GTATGATCCA GAAGAAATCA CCGCGATAAA GGCAAATACG
GGCAAATAA
 
Protein sequence
MKRLSFLVLL FISTLSLAQQ TGGPARWSAA KANAWYAREP FLVGANYAPA NAINELEMFQ 
AETFDPATID KELAMAESIG MNTMRVFLHD LLWQDPAGFT KRLDQFLTIC AKHKIRPMLV
LFDSCWDPNP KLGKQREPTP GIHNSGWVQS PGADALTDVS QYPRLEAYVK GVVGAFKKDK
RILAWDVWNE PDNTNDNSYG QNHTLKTEVP KPRKIAIVTS LLPHVFEWAR AAGATQPLTS
GIWVYRTPEE WQNPAKWTPM EKVQMENSDI ITFHQYSNPE TLEKTIPAML SFGRPVICTE
YMARGVASKF QTHLPIAKKA KVGMINWGFV AGKTQTFIPW DSWQKPYVNG REPAVWFHEV
FKQDGTPYDP EEITAIKANT GK