| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3037 |
|---|
| Symbol | |
|---|
| ID | 8726789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3684311 |
|---|
| End bp | 3686863 |
|---|
| Gene Length | 2553 bp |
|---|
| Protein Length | 850 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003387847 |
|---|
| Protein GI | 284037917 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.762203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.221922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGAT CGTTTATCTT TTTCACCTGT TCGTTGCTTT GCGTTGGTCC ACTACTGGCC
CAGCAAACTT CAAAAACAGC TCGCCCCAAG CCATATTCAT TCACAAAAGG TCTCGTAGCC
CTAACCGGCA GTCGTTACGG TCGGGAAGCC ATCTACACCG ACCCACTGGC TTATCAGTTG
TACACTGGTA CACTCCAACA GCCTGTCGAA GGCGCGGTAT TTGGTAAAGA TGAACAAGGG
GCTGATATCA AATGGATTGC GGTAACGGCC GACAGTCTGA ACCGACTCCG GTTGCGGGGT
GGTTTTAGGG GTAATGCTGG CGCACCGGCT GGCCCCGGCG TGGTAGCCGG TAACCTCCGG
GGAGGCATTG GCGGGGGTGG GGGCTATACC TACCTGACTT ACCCATCGAC CCGCGAACAG
ATTGCGGTAC TTGATATAAA AGGTAACAGC AACGTATACG TTAATGGCGA ACTGCACATG
GGCGATGTGT ACAGCATGGG CTATATGCAT ATTCCCGTTA AGCTCCGGAA AGGGCTGAAT
GAATTTTACG TTCGGGGCGT CATGATAACC GCCAGCCTGA GTTTCCCGGA CAAGCCCGCT
ATGCTGGCTA CCGACGATCC AACCCTGCCC AGTATTCGGT TAGGCGAGTC GAACGCGTCG
CTTCAGGGAG CGGTGGTTGT GGTCAATACC TCAGCGACAC CGCTGAATGG GCTGCAACTG
ATTAGTAAAC TGGCTGGCAA AACATATACG ACTTCGCTGC CCGTTGTTCC TGCCTTATCG
AGCCGAAAAG TAGCTTTCAC ATTCGACGGG AGTGGCGTCA CGGCGAAAGG TGCCCAGCCC
TGCGAGTTAA CGCTCGTTCA AAAAGGCAAG TCGCTCGATA CCGGGACGAT TTCGGTGGAA
GCCGTTCCGG CCGGAGCATC ATACAGCCAA ACGTTCATTA GTCACATCGA CGGGAGTTTA
CAATATTATG CCGTAACCCC CCAATCATCG GCGACGACCG CTCCTTCGGC TCTGTTCCTG
TCGGTGCATG GTGCGGGTGT CGAAGCCATC GGACAGGCGC GGGCGTACAA AGCTAAAGAC
TGGGGAAATC TGGTAGCGGC TACCAACCGT CGGCCGCGCG GTTTCAACTG GGAAGACTGG
GGCCGGTTAG ATGCCCTGGA AGTATTGTCT ATTGCCAGAA ATCGGTTCAA GCCTGATCCG
CAGCACATCT ATCTGACCGG CCATTCCATG GGTGGGCACG GCACCTGGTT TCTGGGGGCT
ACTTACCCCG ATAAATGGGC AGCCATAGCT CCCTGTGCAG GTTACCCGAC GCTGAAAGAA
TACGGTTCTG CCGATGGGGT AATTCCGGAA ACCAGTAACG ACCCACTGGA ACAGATGCTG
TTACGGGCCG GTAACCAGAG CGACGTATTG AAACTGACAA GCAACTACAA GCCGCTGGGT
GTGTACGTTC TGCACGGTGA TGCCGACCGG ACGGTTCCCG TAACTTACGC CCGGCAAATG
CGGAAATTGC TTGGTGAGTC GCAGCCCGAT ATGAGTTATT ATGAGTACCC CGGTGGAAGT
CACTGGTTTG GTGACGAGAG CGTTGACTGG AAACCCCTAT TCGATTTCTT CAAATGGCAC
CGGATTGCCG CCGACTCTGC GGTAAACGAC ATCGATTTTA TTACGGCTAA TCCGGGCATT
TCGTCTGCAT ATCGGTGGGC GGCCATTGAG CAGCAGATAC AACCATTGCT CTACAGCCGG
ATGCAGCTCA CCCGCCGGGG AAAGGCCATT ACTGGTACAA CGTCGAACGT GGCCCTTCTG
AAGCTGGCAC TGCATGACTT TGCCGTAAAC ACACCACTGA CAATAACACT GGATGGCAAT
CCGGCCATCG CCTATACGAC TAGTCGTGCG CAGGATACGC TCTTCCTCCG TCGGGAAAAC
GGGAAGTGGC AACAGGCACA GCGTCCAGAT ATGGCCCAGA AAGGACCTCA TCGGAATGGG
ACGTTTAAAG ACGCCTTTAA CAACCGGATG GTATTCGTGT ACGGAACGAA GGGCACGAAA
GAAGAGAACG AGTGGAATTG GCAGAAAGCA CGCTACGATG CAGAAACCTG GTATTACCGG
GGCAATGGGG CTATTGATAT ATTAGCTGAT ACCGATTACT CGCTGGCAAA ATACACTGAT
CGGGGCGTTG TGCTGTTCGG AAACGCGACC AACAATGCTG CCTGGAAGTT ACTACTGGCT
GACTGCCCCA TTCAGATGGA ACGCAACCGT ATTCGGGTTG GCGATCAGCA GTGGCAGGGC
GACGATCTGG GCGCGTATTT CGTCTGGCCC ATTAAAGAGT CGGCTACGGC ATCGGTAGCG
GTCATTGGTG GAACGGGAGT GAAAGGTATG CGGGCGGCTT CGGCTAACCA ATACTTTGCC
GGGGCCAGTG GCTTTCCCGA CTTCATGATT TTCGGCCTGG ATATGGTTCG TTTGGGCAGC
AAGGGAGTCC GAATGGCGGG TTTCTTCGAT AATGCCTGGA AACTGATTCC GGAGTACACA
GCTGTAAACA GCCAGAAGAA CAGTACTGAA TAA
|
|---|
| Protein sequence | MLRSFIFFTC SLLCVGPLLA QQTSKTARPK PYSFTKGLVA LTGSRYGREA IYTDPLAYQL
YTGTLQQPVE GAVFGKDEQG ADIKWIAVTA DSLNRLRLRG GFRGNAGAPA GPGVVAGNLR
GGIGGGGGYT YLTYPSTREQ IAVLDIKGNS NVYVNGELHM GDVYSMGYMH IPVKLRKGLN
EFYVRGVMIT ASLSFPDKPA MLATDDPTLP SIRLGESNAS LQGAVVVVNT SATPLNGLQL
ISKLAGKTYT TSLPVVPALS SRKVAFTFDG SGVTAKGAQP CELTLVQKGK SLDTGTISVE
AVPAGASYSQ TFISHIDGSL QYYAVTPQSS ATTAPSALFL SVHGAGVEAI GQARAYKAKD
WGNLVAATNR RPRGFNWEDW GRLDALEVLS IARNRFKPDP QHIYLTGHSM GGHGTWFLGA
TYPDKWAAIA PCAGYPTLKE YGSADGVIPE TSNDPLEQML LRAGNQSDVL KLTSNYKPLG
VYVLHGDADR TVPVTYARQM RKLLGESQPD MSYYEYPGGS HWFGDESVDW KPLFDFFKWH
RIAADSAVND IDFITANPGI SSAYRWAAIE QQIQPLLYSR MQLTRRGKAI TGTTSNVALL
KLALHDFAVN TPLTITLDGN PAIAYTTSRA QDTLFLRREN GKWQQAQRPD MAQKGPHRNG
TFKDAFNNRM VFVYGTKGTK EENEWNWQKA RYDAETWYYR GNGAIDILAD TDYSLAKYTD
RGVVLFGNAT NNAAWKLLLA DCPIQMERNR IRVGDQQWQG DDLGAYFVWP IKESATASVA
VIGGTGVKGM RAASANQYFA GASGFPDFMI FGLDMVRLGS KGVRMAGFFD NAWKLIPEYT
AVNSQKNSTE
|
|---|
| |