Gene Slin_3032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3032 
Symbol 
ID8726784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3672960 
End bp3674117 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content50% 
IMG OID 
ProductMannan endo-1,4-beta-mannosidase 
Protein accessionYP_003387842 
Protein GI284037912 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGC ATATAGATCA ATTGACATGG ATAAGCCTTA TACTAGCTTT ACTTTGTGTA 
AAACCGCTTC TTGCCGACAA TCCCAAATAC AAACCTATAG ATACCAAAGC CACTAAAGAG
ACAAAAGCCT TATACCGTAA TCTGCACAAA CTGGCCAAAA AGCATATTCT ATTTGGTCAT
CAGCACGCCA CCGAATACGG ACATGGCTGG GCGGGCGATG ACAACCGCTC CGACGTTAAA
TCAGTTAGTG GGTCGCATCC GGCCGTAATT GGGGTCGACT TTAGTGGTTT GTCGGGCAGG
CCAACTGCGG CCATTGACAA AGCAAAAGAG TCACTTCGGA AGCAGATTGT CGATACCTAC
GACCGGGGTG GCGTAACTAC GGTAGCCTGG CACTTCTCAA ACCCAGCTTC CAAAGGAGGC
TTCTACTGGG TCGATTCTGT TTCTGCTCCC GCCGTGTCGT TGCTGATTCC CGGCGGCTCG
CATCATGAGC AATACAAAGA AATACTCCGC ACGATCGGCG ATTTGGCAAA GTCAGTGAAG
GGGAAAGACG GTACGCTGGC CCCAATGATT TTTCGTCCCT ATCATGAATT CGACGGGGGG
TGGTTTTGGT GGGGAAAGCC CCACTGCAAG CGGGAAGACT TTATCTCTTT GTGGCAGTTC
ACCGTTTCCT ATCTGCGCGA CAGCCTTCAG GTACACAACT TCATTTATGC ATTCTCGCCC
GATTGCCTGT TCAAAACGGA AGCAGAGTAC CTCGAACGGT ATCCGGGAGA TGAATGGGTC
GACATGCTCG GCATGGACAA TTACGCCGAC TTTGGGCGTA ATGGACGTTA CAATGTGGCT
GCGGGTATTC AGAAACTCAA GATCGTGTCT GACTATGCCC AAAAAGCTGG CAAACTAGCC
GCATTTACAG AGACAGGGCT GGAATCTATA CCCGACACGA CCTGGTGGAC AAACACGTTG
CTAAAATCCC TGAAAGCCGA GAAAATGCGG CTTTCCTATG TGCTCGTCTG GCGAAACGAC
AGGCAAAGTC CCACGCATTA TTACGCTCCT TATCCCGGTC AGGCCAGTGT GCCGGATTTC
CTTAACTTTT ACCATGACCC GTACACCTTG TTCGAGACCG ACCTGCCGAA TATGTATAAA
CGCAAGCTAT TTTTCTAA
 
Protein sequence
MSKHIDQLTW ISLILALLCV KPLLADNPKY KPIDTKATKE TKALYRNLHK LAKKHILFGH 
QHATEYGHGW AGDDNRSDVK SVSGSHPAVI GVDFSGLSGR PTAAIDKAKE SLRKQIVDTY
DRGGVTTVAW HFSNPASKGG FYWVDSVSAP AVSLLIPGGS HHEQYKEILR TIGDLAKSVK
GKDGTLAPMI FRPYHEFDGG WFWWGKPHCK REDFISLWQF TVSYLRDSLQ VHNFIYAFSP
DCLFKTEAEY LERYPGDEWV DMLGMDNYAD FGRNGRYNVA AGIQKLKIVS DYAQKAGKLA
AFTETGLESI PDTTWWTNTL LKSLKAEKMR LSYVLVWRND RQSPTHYYAP YPGQASVPDF
LNFYHDPYTL FETDLPNMYK RKLFF