Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3032 |
Symbol | |
ID | 8726784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3672960 |
End bp | 3674117 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | Mannan endo-1,4-beta-mannosidase |
Protein accession | YP_003387842 |
Protein GI | 284037912 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGC ATATAGATCA ATTGACATGG ATAAGCCTTA TACTAGCTTT ACTTTGTGTA AAACCGCTTC TTGCCGACAA TCCCAAATAC AAACCTATAG ATACCAAAGC CACTAAAGAG ACAAAAGCCT TATACCGTAA TCTGCACAAA CTGGCCAAAA AGCATATTCT ATTTGGTCAT CAGCACGCCA CCGAATACGG ACATGGCTGG GCGGGCGATG ACAACCGCTC CGACGTTAAA TCAGTTAGTG GGTCGCATCC GGCCGTAATT GGGGTCGACT TTAGTGGTTT GTCGGGCAGG CCAACTGCGG CCATTGACAA AGCAAAAGAG TCACTTCGGA AGCAGATTGT CGATACCTAC GACCGGGGTG GCGTAACTAC GGTAGCCTGG CACTTCTCAA ACCCAGCTTC CAAAGGAGGC TTCTACTGGG TCGATTCTGT TTCTGCTCCC GCCGTGTCGT TGCTGATTCC CGGCGGCTCG CATCATGAGC AATACAAAGA AATACTCCGC ACGATCGGCG ATTTGGCAAA GTCAGTGAAG GGGAAAGACG GTACGCTGGC CCCAATGATT TTTCGTCCCT ATCATGAATT CGACGGGGGG TGGTTTTGGT GGGGAAAGCC CCACTGCAAG CGGGAAGACT TTATCTCTTT GTGGCAGTTC ACCGTTTCCT ATCTGCGCGA CAGCCTTCAG GTACACAACT TCATTTATGC ATTCTCGCCC GATTGCCTGT TCAAAACGGA AGCAGAGTAC CTCGAACGGT ATCCGGGAGA TGAATGGGTC GACATGCTCG GCATGGACAA TTACGCCGAC TTTGGGCGTA ATGGACGTTA CAATGTGGCT GCGGGTATTC AGAAACTCAA GATCGTGTCT GACTATGCCC AAAAAGCTGG CAAACTAGCC GCATTTACAG AGACAGGGCT GGAATCTATA CCCGACACGA CCTGGTGGAC AAACACGTTG CTAAAATCCC TGAAAGCCGA GAAAATGCGG CTTTCCTATG TGCTCGTCTG GCGAAACGAC AGGCAAAGTC CCACGCATTA TTACGCTCCT TATCCCGGTC AGGCCAGTGT GCCGGATTTC CTTAACTTTT ACCATGACCC GTACACCTTG TTCGAGACCG ACCTGCCGAA TATGTATAAA CGCAAGCTAT TTTTCTAA
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Protein sequence | MSKHIDQLTW ISLILALLCV KPLLADNPKY KPIDTKATKE TKALYRNLHK LAKKHILFGH QHATEYGHGW AGDDNRSDVK SVSGSHPAVI GVDFSGLSGR PTAAIDKAKE SLRKQIVDTY DRGGVTTVAW HFSNPASKGG FYWVDSVSAP AVSLLIPGGS HHEQYKEILR TIGDLAKSVK GKDGTLAPMI FRPYHEFDGG WFWWGKPHCK REDFISLWQF TVSYLRDSLQ VHNFIYAFSP DCLFKTEAEY LERYPGDEWV DMLGMDNYAD FGRNGRYNVA AGIQKLKIVS DYAQKAGKLA AFTETGLESI PDTTWWTNTL LKSLKAEKMR LSYVLVWRND RQSPTHYYAP YPGQASVPDF LNFYHDPYTL FETDLPNMYK RKLFF
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