Gene Slin_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3005 
Symbol 
ID8726756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3638654 
End bp3639463 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content48% 
IMG OID 
Productfatty acid hydroxylase 
Protein accessionYP_003387815 
Protein GI284037885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTACT TAACAAGTCC GGCCACGGTA GCACTGACGG CTTTACTTTT TTTTATCGCT 
ATTTTCGGAC GCTACGTTCT TTTTTCGTTG GGGTTCTGGT GGCTATTCAA CGTCTCGCTG
AAAGAGCAGT TTGCTCACCG GGCGGTTCAG ACGCGCCCCC GGAAAGCCGG GCAGGATTGG
CATGAAATAG GCTGGTCGGT TGTTACATCG CTGATTTTTA CGGGTATTGC AATTGGGGTC
ATCTACGCCT ACCAGCTTGG CTATACCCAG ATTTATACCG ATATACATGC CTATCCATTA
CTGTGGTATC CGGCCAGCAT TCTGTTAGTA CTCTTCATTC ATGAGACGTA CTACTATTGG
CTGCACCGAT GGATGCACCG GCCGGGCGTT TATAAACTGG TTCACAAAAC CCACCACGAC
AGCATTACAA CCTCGCCCTG GACCGCCTTT TCGTTTCATC CGACCGAAAG CACATTACAG
GCAATTGTCA TTCCGGCCCT TACATTCATT TTACCGCTGC ACATATCAGC AGTAGGGCTT
ATTTTGATAA TTATGACCAT GTCGAGCGCC ATAAATCACC TGAATACAGA AATTTATCCG
CAGGATTTTA ACCGGCACTG GCTGGGTCGA TGGCTCATTG GAGCAACCCA CCATAGTCTT
CATCATACCC AGTTCAGGTT CAATTACGGC CTATATTTCA CCTTCTGGGA CAAATGGATG
AACACCGAAA GCCCGGACTA TCATCGCTTG TTTGGGGAGA AGAGTAAGAA AACAGTAGGA
TCAGTAGTAG AAGCGAGGAG TGAAGAGTGA
 
Protein sequence
MIYLTSPATV ALTALLFFIA IFGRYVLFSL GFWWLFNVSL KEQFAHRAVQ TRPRKAGQDW 
HEIGWSVVTS LIFTGIAIGV IYAYQLGYTQ IYTDIHAYPL LWYPASILLV LFIHETYYYW
LHRWMHRPGV YKLVHKTHHD SITTSPWTAF SFHPTESTLQ AIVIPALTFI LPLHISAVGL
ILIIMTMSSA INHLNTEIYP QDFNRHWLGR WLIGATHHSL HHTQFRFNYG LYFTFWDKWM
NTESPDYHRL FGEKSKKTVG SVVEARSEE