| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2992 |
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| Symbol | |
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| ID | 8726743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3620239 |
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| End bp | 3621969 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003387802 |
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| Protein GI | 284037872 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.145444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TAAGCATACT CATCAGTGTC TTTTGTCTGG CAATAGCAAG TTCCTGCTCG
GATAAATTTC TGGACGTACA GCCCAAAGCC GCTCTGGCGG TTAACACGTT ACAAAATAAA
ACGGGTGTTA ATGCCCTGCT GATCGGCGCC TATTCCCTGC TAGACGGCTG GGCTACGCCC
GAAGGAGCTT ACCGTTCGTA CCAGGTTGGT GCCGATAACT GGGTATATGG TAGTGTTGCC
AGCGACGACG CCTATAAAGG AACTATTGCC GGTGACCAGC CCCCTATCTC CCTGATTGAA
CAGGGGAACA TCCAGTCAGA CAATGTCTAT TTCCGGGGCA AATGGCGGGG CATGTACGAT
GGCATCGCCC GCTCTAACGA CGTATTACAG GCCTTGCCGG TTGTTAAGGA TATGACTGAT
GCCGAAAAAA CTCAGGTTAC GGCCGAAGCT CGCTTCCTGC GGGGACACTA CCATTTTGAA
CTCAAAAAGA TGTTCAATAT GGTACCCTAC ATCGATGAAA AGATTTACAA CCCCAATGAT
CTGGAAAGCA CCAAAGTGCC GAACAGCGCT GATATCTGGC CTAATATCGT TGCCGACTTA
AAAGCGGCTT ACGAAGTACT TCCTGCTAAG CAATCGCAGG TTGGCCGTCC AACAAAATGG
GCCGCAGCTG CCGAATTAGC TAAAGCGTAT TTGTTCCAGA AAAAACACGC TGAAGCCAGA
ACGCTACTGG AAGCCATTGT AGCCAGTGGT CAATATAAAC TGGTAGACAA ATACCACGAC
AATTTCAGAG CGGTTACCAA CAACAATGCG GAGTCGATCT TCGAGATTCA GTACTCGGTC
AATGATGGAG CCTCGGGTGG CGAAAACGGT AACATTGGAT CAACGCTGAA CTACCCCTAC
GGTGGTGGTG GCGTAACAAC ATGCTGCGGC TTTTTCCAGC CCTCTCAAAA TCTGGTGAAT
GCATTCAAAA CAGATGCTAA TGGGTTGCCC CTGGTCGACT CCTTCAATGC CTCGGATATG
ACTAACGATC AGAGTATTGA ATCAACAGCT CCTTTCACGC CTTACACCGG TCCGGTTGAC
CCACGCCTGG ACTGGACCGT TGGTCGCCGG GGTATTCCGT ATTTGGACTG GGGTGTGCAT
CCTGGCAAAG CTTACGTACG TGATCAGGCT TATGGTGGCC CCTACTCGCC AAAAAAACAC
GTCATGTATC GGTCTGACGT TGGGACAAAC ACCTTTGCCG GTAACCCGCG TTTGAATGCG
AACAATTACC GCCTGATCCG ATATAGCCAT GTATTGCTCT GGCTGGCTGA AATTGAAGTT
GAGATCGGCG ATTTGAATAA AGCCCGTGGC TATGTCAACC AGATTCGCCG ACGAGCGGCC
AATCCCGATG GCTTTGTGAA AACCGCCGAT GGCTCACCAG CGGCCAACTA TGTTATTAAA
GAATATACGA CATCCTGGAC GGATCAGGCC ACAGCCCGCA AAGCCGTTCA ATTTGAACAA
CGGCTTGAAT TCGGCATGGA AGGTCACCGC CGATTCGACC TCGTTCGCTG GGGCTTGGCT
GACCAAACGC TCAATTCGTA CTACAGCACA GAAGCCAAGA AACGATCATA CCTGAATGGC
GTTCAATTCA TCAAAGGCCG ACACGAGTAT TTCCCCATCC CGCTTCAGGA GATATTCAAC
AGCAAAAAAG ACGGTAAAGA AACGTTGACA CAGAACCCTG GTTACAATTA A
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| Protein sequence | MKKISILISV FCLAIASSCS DKFLDVQPKA ALAVNTLQNK TGVNALLIGA YSLLDGWATP
EGAYRSYQVG ADNWVYGSVA SDDAYKGTIA GDQPPISLIE QGNIQSDNVY FRGKWRGMYD
GIARSNDVLQ ALPVVKDMTD AEKTQVTAEA RFLRGHYHFE LKKMFNMVPY IDEKIYNPND
LESTKVPNSA DIWPNIVADL KAAYEVLPAK QSQVGRPTKW AAAAELAKAY LFQKKHAEAR
TLLEAIVASG QYKLVDKYHD NFRAVTNNNA ESIFEIQYSV NDGASGGENG NIGSTLNYPY
GGGGVTTCCG FFQPSQNLVN AFKTDANGLP LVDSFNASDM TNDQSIESTA PFTPYTGPVD
PRLDWTVGRR GIPYLDWGVH PGKAYVRDQA YGGPYSPKKH VMYRSDVGTN TFAGNPRLNA
NNYRLIRYSH VLLWLAEIEV EIGDLNKARG YVNQIRRRAA NPDGFVKTAD GSPAANYVIK
EYTTSWTDQA TARKAVQFEQ RLEFGMEGHR RFDLVRWGLA DQTLNSYYST EAKKRSYLNG
VQFIKGRHEY FPIPLQEIFN SKKDGKETLT QNPGYN
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