Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2966 |
Symbol | |
ID | 8726717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3582006 |
End bp | 3583601 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | PKD domain containing protein |
Protein accession | YP_003387777 |
Protein GI | 284037847 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.506413 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTAA GTTGCAACCC GTGGGACTTA CCGACTAAAA AGTCGCAGCG TGAGTGTGTT AAGCCATCGG GTACCCTCAA TGCCCAGCCT CAACAGCGAA TTGTGGATTT TTCAATCAGT GGCGGCAGTG GTACCATCGA TAAAGTGGTT TGGGATTTTG GCAATGGCTC CACGGCCACC ACTACCGGCC TAACAACTAA GTACACGTAT CCGGCCAATG GTACGTATAC CGTGAAGGCT ACGCTGACAA ACACCTGCGG TCTTGAAACC ACACTTCAGC AGGTCGTTAC GGTAAGTGAT GCGGTGAAGC CGACAGTAAC GTTACAGGCT ATTACTGCGT ATTCGGCCAC TACAGCAGTA GCAGGAATGT CCATAACATC CAATGGCAAC GCACCAATTA TTCGGTATGG GGTATGTTAT TCAGCTGTCA AACAATCACC GGAAGTCGAT ATAGATAAAA CAGAATCGTT TACGACTACA GCTCCGCTTA ATACCGCGTT GCCCGTTTCA CTTACGAACC TTCAGCCCAA TACACTGTAT TACGTACGGA GTTTTGCGGT GAATTCCGCT GGACTAATTA GCTACAGTAC GGTACAAACA TTCCAGACTG GGCAGAATCC AGCGGTGGCT GTAAACGGCA CCGCAAGTGT AGGTATTACA ACGGCTGGGA TTAATTTCAT TGTATCGAAT CTTGGTAATC CGGCAGCTTA TGAATTTGGT ATCTATTACT CCTCTACTAC CAGCACACCG GATGTGAACA GTCCGGCTGC CAAAGTTGCC AGCCCTTCAG TAGGGAATCC TATAGTCATT ACACTTAATG ATCTGACGCC CAGTAAAATA TACTATTATC GGGCGTATGC CAGACTGTCA TCCGGTGAAA TAATTTATGG ACCTATTTTG TCCTTTACAA CCCAGGCCGA TCCTGTATCC CAGGACTTAA TTGCCTCCGT ATCGTTCAAT GATAAATCGC TTCAGGATGT CAGTGGTTAT AATAACCACG TCAAACTGGT TGACAATGCC ACCTTTACAA CAGATCGTAA CGGTCGGGCG AACTCGGCTA TTCTGTTGGA TGGCTCGGGC GATTACTTCT ACATGGATGA TAATAGCAGC CTGAATCCGG ATGCTATGAC CGTTAGTTTA TGGATTAAAC CGGTAGCCAT AAACGGACGA ATGCAGATTT ATAATAAATC CCGCTTCAGC GATGGCCTGC CTCAAACGTA CAGCTCTTTA ATTAAATTGG AAGGAGATGT TGGTCCTGCC CTCACGTTCA TGACCAACAT TAAGCAAAAT AGTAATTGCG TGGGTGGAGT GGGCTGGCAG GATCTGGCGT TTACCAGTCC GGTCGTGTTG AATACTTGGT ATCACCTCGT CTTTACCTAC AGCGGTCGGT CGGCCCGGAT GTACTTTAAT AACATTCTCG TCTTCAAAAC GGATAATCTA CCCGCCACCG CAATCGATAA GTGCCCCGGT GGGGAGCTTA AATTCGGTGC ACAGTACCAG TCGTTGCCGT GGTATTTCAA CGGCGCCATG GACGACATCC GAATTTACAA GCGGGCCATC ACGGCTGCCG AAGTTGAAAC TTTATTCAAG CAGTAA
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Protein sequence | MILSCNPWDL PTKKSQRECV KPSGTLNAQP QQRIVDFSIS GGSGTIDKVV WDFGNGSTAT TTGLTTKYTY PANGTYTVKA TLTNTCGLET TLQQVVTVSD AVKPTVTLQA ITAYSATTAV AGMSITSNGN APIIRYGVCY SAVKQSPEVD IDKTESFTTT APLNTALPVS LTNLQPNTLY YVRSFAVNSA GLISYSTVQT FQTGQNPAVA VNGTASVGIT TAGINFIVSN LGNPAAYEFG IYYSSTTSTP DVNSPAAKVA SPSVGNPIVI TLNDLTPSKI YYYRAYARLS SGEIIYGPIL SFTTQADPVS QDLIASVSFN DKSLQDVSGY NNHVKLVDNA TFTTDRNGRA NSAILLDGSG DYFYMDDNSS LNPDAMTVSL WIKPVAINGR MQIYNKSRFS DGLPQTYSSL IKLEGDVGPA LTFMTNIKQN SNCVGGVGWQ DLAFTSPVVL NTWYHLVFTY SGRSARMYFN NILVFKTDNL PATAIDKCPG GELKFGAQYQ SLPWYFNGAM DDIRIYKRAI TAAEVETLFK Q
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