Gene Slin_2899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2899 
Symbol 
ID8726650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3502248 
End bp3503213 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content53% 
IMG OID 
ProductKelch repeat-containing protein 
Protein accessionYP_003387711 
Protein GI284037781 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGCT ATTTTCGCTA TTTTCTGGGC TTTGCCAGCA TCAGTATGGG TGTTCACGCG 
CAAACCTGGC AACCCGTTAT CACACAAAAC GCGTGCTCTG TTCGGCACGA AAACGCAGCC
ACGTTGATTG GAGACAGTCT GTATGCTGTG GGTGGCCGGG GTATGAAGCC GCTCGAAGCG
CTCAACCTGA AAACGCTCGT TTGGCAAACG CTTCCTACTC CACCCGTTGA AATGAACCAC
TTTCAGGCTA TCACGTACCA GGGAGAACTG TACGTAGTGG GCGCTTTTCA GGGAAAATAC
CCGCACGAGA CCCCCTTGCC AAACATTTAT ATATACAGTC CTAAGACGGG GAAATGGCGT
ACCGGCCCCG AAATACCGAA GGAGCGGCTC CGGGGCTCGG CAGGCGTAGT CGTGTACAAA
AACAAAATAT ACATGGCCTG TGGCATTATC GACGGGCACT ACGATGGGCA TGTAGCCTGG
CTGGATGAGT ATGACCCGAA AACGAATACC TGGAAACAGC TTCCCGATGC CCCCCGCACC
CGCGATCATA TTACAGCCGC TGTGGTAGGC GATAAGTTGT ATCTGGCCGG TGGCCGTAAT
TCAACGGCGC GGATCAATAA AGTACTGGAA ACGACCATTG CTGAGGTCGA TGTGTACGAT
TTTAAAACGG GCCGCTGGGA AACCCTGCCC GCCACAGCTA ACATCCCAAC CCAGCGTGCG
GGTGCTACGG CCGTGACGCT GGGTGGTAAA GTCTGGATCA TTGGTGGCGA AACTGTACAA
TTGCTGGCTC ATAACGAAGC CGAAGCGCTC GATCCAAAAA CAAATAAGTG GATCGCTGGC
CCAACCCTAA AACAGGGCCG TCATGGTACG CAGGCGGTCG TTTACAAGGA TAAAATCTAC
ATTGTTGCGG GCTCGGCTAA TCATGGCGGT GGACCGGAAC TGAACACCGT TGAAGTAATG
AAATAA
 
Protein sequence
MKGYFRYFLG FASISMGVHA QTWQPVITQN ACSVRHENAA TLIGDSLYAV GGRGMKPLEA 
LNLKTLVWQT LPTPPVEMNH FQAITYQGEL YVVGAFQGKY PHETPLPNIY IYSPKTGKWR
TGPEIPKERL RGSAGVVVYK NKIYMACGII DGHYDGHVAW LDEYDPKTNT WKQLPDAPRT
RDHITAAVVG DKLYLAGGRN STARINKVLE TTIAEVDVYD FKTGRWETLP ATANIPTQRA
GATAVTLGGK VWIIGGETVQ LLAHNEAEAL DPKTNKWIAG PTLKQGRHGT QAVVYKDKIY
IVAGSANHGG GPELNTVEVM K