Gene Slin_2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2860 
Symbol 
ID8726610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3454418 
End bp3454924 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387673 
Protein GI284037743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.292363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.424057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTAA CCCTGATTGG GGTATTAGTT AGCGTAGTAA CCTGGGCGCA GGGAGACAAA 
GCCAACCGCC CCAGTCCACC CGCTATGGCG AGTGGTAAAG TAAATGGTGC CTCCATTGTT
ATCAGTTATG GCAGCCCATC GGTAAAAGGA CGACCTGTCT GGGATGCAGG GAGCACACTG
GCTCCTTATG GAAAAGTATG GCGATCGGGG GCAAACGAGG CTACAACATT CGAAACGGAT
AAGGATATTA TGGTAGAAGG AAAAGCGCTG CCCGCTGGCA AATACGCCTT CTTTACTATC
CCTGGCGAGA GTGAATGGAC CGTTATCTTT AATAAAGTAG CCAATCAGTG GGGAGCGTTC
AAATACGACC AGGCTCAGGA TGCACTCCGG GTAACGGCCA AGCCCATCAA ATCTGCCCAA
ATGAGCGAGC GACTTGTTTA TGATGTGACT GGTAAGGGCA TTGTATTAAA GTGGGAGCAT
ATTGAATTGC CTGTTGCTAT AAAATAA
 
Protein sequence
MALTLIGVLV SVVTWAQGDK ANRPSPPAMA SGKVNGASIV ISYGSPSVKG RPVWDAGSTL 
APYGKVWRSG ANEATTFETD KDIMVEGKAL PAGKYAFFTI PGESEWTVIF NKVANQWGAF
KYDQAQDALR VTAKPIKSAQ MSERLVYDVT GKGIVLKWEH IELPVAIK