Gene Slin_2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2857 
Symbol 
ID8726607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3452176 
End bp3453114 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387670 
Protein GI284037740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.128156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.202978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACA CAGTAGTTGG TGTATTCGAC AACGCCACAG AAGCCCAAAA GGCAGTAGAT 
GAGTTAGTAG ACAAAGGATT TTCGCGCAGC AGCATTGATT TGTCAGCGCA AACAGGCGAC
TACTCAAATA GTGATCTGGA CGACGATGAT GATTCAAGCG TGGGCGGCTT TTTCAGTTCA
TTATTCGGTA GCGATGATGA TAATGCCAGA CGCCATACGC GGGTTGCCAG CCGTGGATCT
GTAGTAACGG TACATGCTCA AACGGACGAT GAGGCAGAGC AGGCCGCCGA TATTCTTGAT
GATAATGGCG CTGTAGATGT AGACGAGCGG GCATCTCAGT ACGGATACGG GAACACCGGA
ACCCAAACAA CAATGGGCAC TACCGGCACA GGCTTTGGCA CAACAGATAC CACGCTGGGC
GCTACTGGGC TCGGTACGGA TGTTACCGGT GTGAACTACG GCGATACCAC AAACCGTGAC
TTGACAACCG ACAACGATCA AACGATCAAG GTTATTCAGG AAAACCTGGA AGTAGGTAAG
CGTGAAGTAG AGCGGGGTGG TGTTCGGGTA CGGAGCCGTA TCATCGAACG GCCGGTTGAA
GAGAGCCTGC GTTTACGCGA AGAGCGTGTA CGGGTTCAGC GGACACCCGT CAACCGTCCG
GCTACGGAAG CTGATCTGAA TGCATTTCAG GAAGGTCAGA TTGAAATGAC CGAACATGCT
GAAGTTCCGG TGGTATCGAA AACGGCCAAC GTCGTTGAAG AAATTTCAGT CGGAAAAGAG
GTCAACGAAC GCGTAGAAAC CATTCGTGAC ACCGTTCGGA GTACGGATGT TGAAGTTGAA
AACATCGACG CACCAAGAAC AACCGATCAG GGTGTTACGA CGAACCGCAC AGGTACAGAT
TACGACGACG ATCTGAACAC CACATCGCTC AACCGATAA
 
Protein sequence
MAHTVVGVFD NATEAQKAVD ELVDKGFSRS SIDLSAQTGD YSNSDLDDDD DSSVGGFFSS 
LFGSDDDNAR RHTRVASRGS VVTVHAQTDD EAEQAADILD DNGAVDVDER ASQYGYGNTG
TQTTMGTTGT GFGTTDTTLG ATGLGTDVTG VNYGDTTNRD LTTDNDQTIK VIQENLEVGK
REVERGGVRV RSRIIERPVE ESLRLREERV RVQRTPVNRP ATEADLNAFQ EGQIEMTEHA
EVPVVSKTAN VVEEISVGKE VNERVETIRD TVRSTDVEVE NIDAPRTTDQ GVTTNRTGTD
YDDDLNTTSL NR