| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2829 |
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| Symbol | |
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| ID | 8726579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3422626 |
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| End bp | 3425037 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003387642 |
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| Protein GI | 284037712 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTGT TACGTTTACT GTTGCTTTCT TTATGGCTTC TCAATGGGGC ATTCGCTCAG
CAAAAAAATG ATTCGGGTAA CAACCCGCCT ACGTTTTCAG CTACGGGTTA TGTGCGGGAC
GCAAAGACCG GTAAACCGAT TCAGGGCGTC AATATCGTAG TGCTGAACGT GTCGAAAGGG
TACGTTACGG CTAAAGATGG TTTTTACACG GTACAACTTC CGCCTGGAAA TTATATTCTC
CGCTTCTCAC ACGTAGGCTA CCGCCCTAAG CAGGATACCA TTTCTCTGCA AAAAACGCTG
TTTCGTGAGG TCGCCATGGA CGATGATGCC AAAGACCTTG ACGAAGTTGT GGTTACCAGC
GAAACTCCTG ACCGGAATGT TCGTAAAGTC GAAATTGGAG TTTCTCAACT GACCATTCGC
AGCATTCGGC GGATTCCGCC CCTCATGGGT GAAGTCGATG TGGTGCGTTC GCTGCTGCTG
TTGCCCGGTG TTACTACGGT CGGCGAAGGC GCGCCGGGTT TCAACGTTCG GGGGGGCGGT
GCCGACCAGA ACCTGATTTT GTTCGACGAA GCGCCGGTAT TTAATTCGAG CCACTTGATG
GGCTTTTTCT CCGTGTTCAA TCCTGATGTA GTTCGCGATG TCACGCTTAA CCGGGGTGGG
GTGGCTGCTG CTTTTGGCGG GAGGGCATCG TCGGTGCTGG ACGTGAAAAT AAAAGAGCCC
GATGCCATGA AATGGGGTGT CAATGGCGGA ATTGGGCTTA TTTCGAGCCG ACTGGGTGTT
GAGGGGCCCC TTATCAAAAA CAAACTGTCT TTTCTGGCCG CTGTACGAGC TTCATTCAAC
GACTTTCTGT TTAAACTGGC CCCGCCAAAC CTGAGAGGGA CACAGGCCAA TTTTTATGAT
CTGACATCGA AACTCAAATA CCAGCCTAAC GAGAAAAATA CGATAACCCT TACCGGATAC
GTCAGTACCG ACGTCTTCAA ACTGGCCTCC GACTCGCTGT CCGGTCAGGA AATTAACGCG
TCATCGACTC GCTTCAATTA CCAGACCATG AACGCGGTAC TGCGCTGGAA TTACTTTATG
AGTAAGCAGA TCAATCTGGC TACATCCGTA ATTCTGAGCC GCTACCAGGC TGATTTGTCT
TCTCCCGATT CGGCCAACGC CTTTCAGTTG AAATCGGGCG TCTGGCACCG GCAGATAAAA
TCAGATCTGA CGTTTACCCC CAATGAGGTT CACCAGTGGC AGGCGGGGGT GAGTGCTATC
GACTATCTGA TCCAGCCCAA TACGCGCATA CCAGGCCCGT ACTCCAACGT TCTTCCCGTC
GACCTGGCCC GCGAACGGGC CTATGAACTG GCCGCTTATA TTCAGGACGA ATGGAAGTTG
AATACGAACG TTGCCATCAT TGCCGGTCTA CGCTATTCTG CTTTGCTAAA CCGGGGACCC
GCCACTGTTC GTGCATACCT GGAAAACGGG CCGAAGGAAG ACGAAAGCGT TGCGTCGGTG
AAAACGTATG ACGCCGGTAA TGTGTACCAT TCGGCGGGTG GGCTGGAACC CCGGCTGGCG
ATTCGCTGGA CGGTGGGCGA CGGCCGGGCT ATCAAAGCGG GGTATAGCCG CCTGCGCCAG
TACATTCAGC AGGTAACAAA TACCACAGCG GCTCTGCCAA CCTCGCGCTG GCACCTGAGC
GACATGTACA CGAAGCCCGT TATTGCCGAC CAATGGTCGC TGGGGTACTT TACCAACACC
ACCGACAATG CCATTGAAGC ATCGGGCGAG GTATATTACA AAACCCTCAC CAACGCCATT
GATTACCGGG ACGGAGCTGA ACTGCAACTG GCACAGGCTG TTGAAACCCA GATTGTGCAG
GGGAGTGGAC AAGCGTATGG CTTTGAGGGA CTGCTTCGGA AAAATAAAGG ACGCTGGACG
GGCTTTATGA GCTACACCTA CGCGCGCACA TTTCTAACGA TGGATGGCCC TTATGCTAGT
GAACGCGTGA ACAACGGTAA CGCATACGCG GCCAACTACG ATAAGCCACA TACCCTCAAC
GTACTGGCTA CGCATCGCCC AACAACCTGG TTTAGTATGT CGCTGAATTT TACGTATAGC
ACCGGTCGCC CAACGACTCA GCCGTCTGCT ATCGCCCGGG TGGCCGGTAT ACTTGTACCT
ATCTACCTCG ACAGAAACCA GCAGCGCGTA CCGGACTATC ACCGGCTCGA CTTCTCAATG
ACGTTTGAAC AGAATCCACT CAAGAAGAAG AAAAATCAGA GCAGTTGGGT CTTCTCCGTC
TATAACGTGT ATGCCCATAA AAATGCGTAT TCGATCTTTT ACAAGTTGAG CCCGGCTTCG
GCTACGGATG CCTATAAGCT GTCAATCTTT GGAACCGCTT TTCCATCGCT GACCTATAAT
TTCAAGTTTT GA
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| Protein sequence | MHLLRLLLLS LWLLNGAFAQ QKNDSGNNPP TFSATGYVRD AKTGKPIQGV NIVVLNVSKG
YVTAKDGFYT VQLPPGNYIL RFSHVGYRPK QDTISLQKTL FREVAMDDDA KDLDEVVVTS
ETPDRNVRKV EIGVSQLTIR SIRRIPPLMG EVDVVRSLLL LPGVTTVGEG APGFNVRGGG
ADQNLILFDE APVFNSSHLM GFFSVFNPDV VRDVTLNRGG VAAAFGGRAS SVLDVKIKEP
DAMKWGVNGG IGLISSRLGV EGPLIKNKLS FLAAVRASFN DFLFKLAPPN LRGTQANFYD
LTSKLKYQPN EKNTITLTGY VSTDVFKLAS DSLSGQEINA SSTRFNYQTM NAVLRWNYFM
SKQINLATSV ILSRYQADLS SPDSANAFQL KSGVWHRQIK SDLTFTPNEV HQWQAGVSAI
DYLIQPNTRI PGPYSNVLPV DLARERAYEL AAYIQDEWKL NTNVAIIAGL RYSALLNRGP
ATVRAYLENG PKEDESVASV KTYDAGNVYH SAGGLEPRLA IRWTVGDGRA IKAGYSRLRQ
YIQQVTNTTA ALPTSRWHLS DMYTKPVIAD QWSLGYFTNT TDNAIEASGE VYYKTLTNAI
DYRDGAELQL AQAVETQIVQ GSGQAYGFEG LLRKNKGRWT GFMSYTYART FLTMDGPYAS
ERVNNGNAYA ANYDKPHTLN VLATHRPTTW FSMSLNFTYS TGRPTTQPSA IARVAGILVP
IYLDRNQQRV PDYHRLDFSM TFEQNPLKKK KNQSSWVFSV YNVYAHKNAY SIFYKLSPAS
ATDAYKLSIF GTAFPSLTYN FKF
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