Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2797 |
Symbol | |
ID | 8726547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3382724 |
End bp | 3386755 |
Gene Length | 4032 bp |
Protein Length | 1343 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003387611 |
Protein GI | 284037681 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGTT CGTTTGTCCG CGCATTACTG CTGCTCCTTA TCGGCTATCC GCTGACCATG AGAGCGCAAT CCGATATCAA CAACTCCGAC CCAACCCGCT GGATCGATTA CTCCCGGTCA TACATCAAAC TATCCATTAC TGAAGACGGC ATTTATCGGA TCAGCCCGGC TGAGTTACGC CTTGCCGGGG TGCCGATCAA TCAACTAAAT TCACAAACGC TTCAGCTCTT TCACCGGAGC GTCGAACAGG CGATTTATGT ACGCGGAGAA GCCGATGGCC GCTTTGATGA TGGCGATTTT CTGGAGTTTT ACGGGCGTCG AAATGATGGG GTAGCGGATT CGCTTCTCTA CCACCCTTCT TCGGCACAGC CTCATCCGTA TTACAGCCTT TTCAGCGATA CAACCGCTTA CTTCCTGACC TGGGGCGCAG ATAAAGTCGG GAAACGAATG GCCGCCTATA CCGATTCATT GGGTGCCGGT CTGACGCCGG AGCCGTTTCA CTGGGCTGAA GAGGTGCGGC TTTTTACCGA TAATTACCCC GGCTGGCCAA ACGGCATAAC GCCCAAAATA GAGTACAGTT ATTACGAAGC GGGCGAAGGG TATACGGGGA CTATTCAGCG AAAAGACAAC CCTTTTTCGC TAACTTTTTC ATTAACGAAC ACAGTTCGAA ACGGCCCAAA CCCACAAGTA GCGGTCCTAT TGGTGGGTCG GGATTACACA AATCATCGTG TCGACTGCCT GCTCGGACCA ACGCCCGACA ATCTGCGACT GGCCGATTCC AGCCGCTTCA CGACCTACGA CAACGCCCGC CTTCAGCCCT TGCTAATCTG GCCTGACGTT GGAACCGATG GGAGACTAGT CGTCTCGACC GTCTCGCGGG GTGAAAACAA TACGATTGAT AACTATTCCG TCTCCTACAT CCGTATACGC TATCCACAGG CTTTCGTTAG CAACGGCCAG CAGGAGCAAG CTTTCCAGCT GACTACCAAT CCCGTTGGGC GGTCGTTGAT TCGTGTTACG AACCTGACGC CCAATATCCG TTTCTGGGAC ATTACCGACC CGACAAATCC GATTCAGCTT AGCCAGTCGA TCCGTTCTGA TTCGGCCGGG CTGACTATCC GTAACACAGA AACCGCCCGA ACGCTCTTCA GCACCAGTCG GCCTAAACGG GTGTCGAAAC TTCTCCCTAT ACACTTCACG GACCTGTCGA GTCGCAGTCC AACCTATGTG ATTATTACCC ACGAAGCCCT GATGACGCCC CTGACAGACT CATTGACCGG TCGAGTTACT AACGCCATCC AATCGTATGC CGCTTATCGG GCCTCGGTCG CTGGTGGTAC GCACGACACA CTAACGATTA CCATGCAACA GCTTATCGAC CAGTATAACT ACGGCGAACG AAGCCCGCTG GCGATTCAGC AGTTTATGAA CCAGATGCGG CAGCAAAACC CCGAACACCT ACGATACTTA CTACTCATTG GCCGGGCACG CAGCACGCCC GGTGTGCGCA ACAACCCCAG CCAGTCCGGT CTGGACATGG TCATGACGGC TGGTTATCCC GGCTCCGACG GCCTGTTAAC GGCCGGGCCG GATGGTGTAC CGGCCATTCC AACGGGCCGC ATCAACGCGG GAACACCGCA GGAGGTAATG AATTACCTGA ACAAGGTGAA AGAATACGAA TCCCAGGCCG ATGACGCAGG CTGGCGGAAG AGCCTGCTCC ACCTAAGTGG AGGGCTGTCG TGGGGCGAAC GGGATTTGTT CCGTCAGCTG GTGGACAGCT ACCGTCTAAC GGTAACGGCA GAATCGTTGG GTGCACAGGC ATCAACGGTT TCTAAAAAAA CGGATAATCC GGTTGAGTTC ATCAGCCTGG CGAAACAGGT TAACGAAGGC GTTGGGCTGA TGACGTTCTT CGGCCACTCA GGATTGGCGA TTACGGACCT GGCAATTGGC TTTTGCTCCG ACGATGCGCT GGGCTACCGC AACAAAGGCC GCTACCCGCT CCTATTGGTA AATGGCTGTG CTATTGGCAA CTTTTTCTTT GGTCGTCCTA CACTAGCCAC CGATTGGGTC CTTACACCAA ACCGGGGCGC TATTGCCGCT TTGGCAACGA GTCACCTTGG CCAGACGGAT GTGATGCACC GCTACACAAC AGCATTTTAT AGTCTGCTGG CCGACAGCGC CCAACTCAAC AAATCCATTG GGCAGCTTCA GCAGGAAACT ATTCGTCGAG TTCTGGCCAG CTCAATCGAC GGACGTGATC TGGCGAACTG CCAGCAAATG GTTCTACAAG GCGACCCGGC CATCCGCCCC TTCCCATTCA GCACGCCCGA CTATGCACTC GCGACCGGCG GGCTGACGAT TCACGGAAAA ACCCAGTCCG AAAACGGGCA GCCGTTAACT ACGCTGAGCG ATTCGGTACA GATTCTGGCT ATTGTTCAAA ATGCCGGGCT GTACCGAAAT AGACCGCTTC CGGTTCGGGT ACGTCGCTGG GTGAATGGAC GAGAATCAGG CGTATTTAAC CTGATCGTTT CACGTTCTGT TGCATTTCGG GATACGCTGG TGATTAGCTT TCCCAATGAA CGTGATACAG CGGGCGAAAA CGAATTTGAG GTTACGATCA ATCCGGCCGA CTCTCCTCTA GCTCAGACCG AACGCAATCA AACCAATAAT CAGGCCCGTA CCCGCCTGAT AATTCCCGGT CAGAATCCCG TTCTTATTTA CCCTCCTTCA AACGGCATCG TTCAGTCTGC CGCTATCCGG CTTACGGCGT CCTACCCATC TACCGAGCCT TATCTTGCTG ACATTGAGTT TGACAGTACC GCTAATTTTA CCAGTTCTTT TAGACAAACA TGGCGCATAA CCGCGACAAA TAACATCAGC ATTCCGGTAA CCTTATCTGC TCCTCACCGC TCCTATTATT GGCGAGTTCG ACTGGCCGAC AGCACAGTAT CCGGTCAGAC AGACATCTGG TCGACCGGTT CGTTTGTGTA TTCACCCGCG AGTATGGCGG AGGGATTGCC CGAAGGTCAA CTCTGGCTAG CCACTTCACT ACCGCCGAAT GTTCAGCAGG GCGACATTGT TCCTGTTCAG GCACTCTTTA CCAACCTGAG TCCGGCTCCA TTTTCGGATT CGCTGGTTGT TCAGCAAACC GTTTACGCAG CGGGCCTGAC AACTCCACAA ACACAACGAT GGACAGTTCC CCCTCCGGTA CATCGCGATA CAATCCGAAT AAATACTCGG ATCGCAACCG GGAAACTCCC CGGTCTGAAT CGGGTTGTGT TAACGGTTAA CCCACGCCTT CAACCCGAAT ATTCGTTCAT CAACAACACG CTCGACCTGC TGTTGCCGGT TCAGCCCGAC CAGATAGGTC CTCTGCTGGA GGTGGCTATT GATGGTGCCC GACTTACAGA TGGCGCCGTT GTTTCGGCTC ACCCGATCAT TGATTTGCTG CTTATCGACG AAAATCGTTC GCTTATCCGG CAAGACACGC TGGGGTTGGC CTTGTATCTG CAAGGACCTG AACTAACTGC TGTTTTTAAG CGATTGAGCT GGAGCGGTTC CATAACCCGG CCAGCGATTG GAACGAATGA ATTCAAAATA CGGTACACCT CGCCCCTGCT GGCCGAAGGA ACTTATCGGC TGCTGGCTAC CGGCCGGGAC ATTGTAGGGA ATTTGGCTGT ACCTTATCAG GTAAACTTTC GGGTGATTAA CGAACGTAAA CTTGCAAACC TGACCGTTTA CCCCAACCCT TTTCGCGACA GAGCTTTGTT TTCAGTCCAT CTGACCGGCG AACAAGCCCC GGCCAAGCTC ACCATTCAGC TATTTAATCT GGCTGGTCAA CCTGTGCGAC AGATAAGCTT GTCTCCCCGC ATTGGTTTAA ATGAGTGTGT GTGGGACGGA CGCGATGAGA CCGGCAACCT GCTCCCGGCG GGTGTTTATC TCTATACAAT CAATCTTTAT GATACCTTCA ACTGGCCTAT TTCCGAGAGC CTGAGCCCTA AGCTGAGCGG CCGGCTTATC CTGCTTCGCT GA
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Protein sequence | MSSSFVRALL LLLIGYPLTM RAQSDINNSD PTRWIDYSRS YIKLSITEDG IYRISPAELR LAGVPINQLN SQTLQLFHRS VEQAIYVRGE ADGRFDDGDF LEFYGRRNDG VADSLLYHPS SAQPHPYYSL FSDTTAYFLT WGADKVGKRM AAYTDSLGAG LTPEPFHWAE EVRLFTDNYP GWPNGITPKI EYSYYEAGEG YTGTIQRKDN PFSLTFSLTN TVRNGPNPQV AVLLVGRDYT NHRVDCLLGP TPDNLRLADS SRFTTYDNAR LQPLLIWPDV GTDGRLVVST VSRGENNTID NYSVSYIRIR YPQAFVSNGQ QEQAFQLTTN PVGRSLIRVT NLTPNIRFWD ITDPTNPIQL SQSIRSDSAG LTIRNTETAR TLFSTSRPKR VSKLLPIHFT DLSSRSPTYV IITHEALMTP LTDSLTGRVT NAIQSYAAYR ASVAGGTHDT LTITMQQLID QYNYGERSPL AIQQFMNQMR QQNPEHLRYL LLIGRARSTP GVRNNPSQSG LDMVMTAGYP GSDGLLTAGP DGVPAIPTGR INAGTPQEVM NYLNKVKEYE SQADDAGWRK SLLHLSGGLS WGERDLFRQL VDSYRLTVTA ESLGAQASTV SKKTDNPVEF ISLAKQVNEG VGLMTFFGHS GLAITDLAIG FCSDDALGYR NKGRYPLLLV NGCAIGNFFF GRPTLATDWV LTPNRGAIAA LATSHLGQTD VMHRYTTAFY SLLADSAQLN KSIGQLQQET IRRVLASSID GRDLANCQQM VLQGDPAIRP FPFSTPDYAL ATGGLTIHGK TQSENGQPLT TLSDSVQILA IVQNAGLYRN RPLPVRVRRW VNGRESGVFN LIVSRSVAFR DTLVISFPNE RDTAGENEFE VTINPADSPL AQTERNQTNN QARTRLIIPG QNPVLIYPPS NGIVQSAAIR LTASYPSTEP YLADIEFDST ANFTSSFRQT WRITATNNIS IPVTLSAPHR SYYWRVRLAD STVSGQTDIW STGSFVYSPA SMAEGLPEGQ LWLATSLPPN VQQGDIVPVQ ALFTNLSPAP FSDSLVVQQT VYAAGLTTPQ TQRWTVPPPV HRDTIRINTR IATGKLPGLN RVVLTVNPRL QPEYSFINNT LDLLLPVQPD QIGPLLEVAI DGARLTDGAV VSAHPIIDLL LIDENRSLIR QDTLGLALYL QGPELTAVFK RLSWSGSITR PAIGTNEFKI RYTSPLLAEG TYRLLATGRD IVGNLAVPYQ VNFRVINERK LANLTVYPNP FRDRALFSVH LTGEQAPAKL TIQLFNLAGQ PVRQISLSPR IGLNECVWDG RDETGNLLPA GVYLYTINLY DTFNWPISES LSPKLSGRLI LLR
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