Gene Slin_2785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2785 
Symbol 
ID8726535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3363017 
End bp3364525 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content47% 
IMG OID 
Product4-amino-4-deoxy-L-arabinose transferase-like protein glycosyltransferase of PMT family 
Protein accessionYP_003387599 
Protein GI284037669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.202141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0690853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAA GATCGCTGAT TTTACTGGGG TTTATTGTCG CTAAGTTCAT ACTACAATAT 
TGGTTGGTCC TTCCAGACTA TGATTTACAT CGGGATGAGT ATCTGCATCT GGACCAGGCC
CATCACTTAG CCTGGGGCTA TTTGTCGGTT CCGCCCTTCA CTTCCTGGAT TGCCCTTCTC
ATCAGTTGGC TTGGCAACTC GATGGTCCTA GTCCACTTTT TCCCAGCCCT CTTCGGGGCA
TTGACCATCC TGATCGTTTG GAAAACGGTC GAGGAATTGA CCGATAGCCT GTTTGCCTGT
GTGCTGGCGG TAAGCTGTCT GCTGTTTTCT GTGCTATTAC GCTTGAACCA GCTCTTTCAA
CCCAATTCGT TGGATGTATT GTGTTGGACA ACGCTCTATT TCGTTCTCAT AAAATATATT
CATTCGAAAC AAACTCGATG GCTTTACATT CTTGGGATTG TCTTTGCCGT TGGGTTTCTC
AATAAGTACA ATGTTGTTTT TCTTTTGGTC GGATTTCTGC CAGCTCTCCT CCTGACCGAG
CAGCGCACAG TGCTACGTAA CCGCCATATG TATGGGGCGC TGTTGGTGGG CCTGCTACTC
ATGGCCCCCA ATCTGTTCTG GCAATATCAG CATGCATTTC CCGTCGTTCA CCACATGAGA
CTCTTGGCCC AGACTCAGTT GGTCCACGTG AACCGGGCCG ACTTTTTGAT GGAACAAATC
TTGTTTTTTA TCGGCTCCTG GGTTGTCATC CTTGGTGGTT TATATGGTCT ATTGGTCTAT
AAGCCGTTTG AGCAGTACCG TTCATTCTTT TATGCACTTA TTTTTACACT TTCGGCTTTC
CTTTTTTTGA GAGCCAAGGG CTATTACGCC ATCGGGATTT ACCCGATTTA TATGGCGTTT
GGCGCTACGT TTCTCGCAGT TAAAGTCAAA TCGATTGGAG TACGCGCTGC TTTAGTAGCC
TTGCCTATTC TATTTTTTAT ACCCTTGTAT CAGGTGGCTT TTCCCAACCA AACACCCCAG
GCAATCGCCC AGCATTCAGA ACGCTATAAA AAATGGGGTC TTTTGCGCTG GGAAGACGGT
AAAGATCATG CCTTACCCCA GGATTTCGCC GATATGCTGG GGTGGCGAGA ACTAGCTACC
AAAGTGGATA CGGTTTATAG CCGCCTGGCT GATCCGCAGG CAACCTTGGT TTTATGTGAT
AATTATGGGC AGGCGGGAGC GATCAACTAT TACACGCGCC AGGGCATTAA AGCCGTCACC
TTTAATGCCG ATTATATTGA CTGGTTTGAT CTAACCAAAA AATACAAGCA TCTCATCCGA
GTCAAAAGCG CTGAAGGAAG CGCTGATGAA CTAAAGGAAA CCAGTCCCTT CTTTACAACT
GCCTATGTAG CGGCCTCGAT TACAAGCCCT TTTGCCCGGG AGCGTGGAAC TACCATATAT
GTTTTTCAAC AAGCCAAGGT GAATATTACA AGTCGGCTTG CAAAAGAAAT TGCTGAGGAG
CGCTGGTAA
 
Protein sequence
MAKRSLILLG FIVAKFILQY WLVLPDYDLH RDEYLHLDQA HHLAWGYLSV PPFTSWIALL 
ISWLGNSMVL VHFFPALFGA LTILIVWKTV EELTDSLFAC VLAVSCLLFS VLLRLNQLFQ
PNSLDVLCWT TLYFVLIKYI HSKQTRWLYI LGIVFAVGFL NKYNVVFLLV GFLPALLLTE
QRTVLRNRHM YGALLVGLLL MAPNLFWQYQ HAFPVVHHMR LLAQTQLVHV NRADFLMEQI
LFFIGSWVVI LGGLYGLLVY KPFEQYRSFF YALIFTLSAF LFLRAKGYYA IGIYPIYMAF
GATFLAVKVK SIGVRAALVA LPILFFIPLY QVAFPNQTPQ AIAQHSERYK KWGLLRWEDG
KDHALPQDFA DMLGWRELAT KVDTVYSRLA DPQATLVLCD NYGQAGAINY YTRQGIKAVT
FNADYIDWFD LTKKYKHLIR VKSAEGSADE LKETSPFFTT AYVAASITSP FARERGTTIY
VFQQAKVNIT SRLAKEIAEE RW