| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2771 |
|---|
| Symbol | |
|---|
| ID | 8726521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3349372 |
|---|
| End bp | 3350250 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003387585 |
|---|
| Protein GI | 284037655 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.698515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTAGAAA CCAAAGGACT GCTAAACCAA ATTAAACACC ACGATCGCTT GCCCATCACG
GTGAATCAAA ATTGTGCTAT CCCCCTGCCA GAAGCGGTAT GGCCAAAACT ACTTCAACCT
CACCAACTTG CCTATTATTA TCTTGTCTTT GTGGATCAGG GACTGGAGAC CTTTCAGCTA
GATGGCCAGA AGCTTACCAT TGCCAATAGG CAGGCAGTCT TTGGCACACC TAACCAAATT
TTTGCGCATC CTGCTCCCAA TAAAGATACG CAACAGTATA AAATTGGATT TGACGAGCAT
ACCCTGGCAC TGCTGCCACA GGCTTTCCCC TTTCTGGTTA ATCCCTTAAA TAGAAATACG
CTTATGTTCG AGCCAGATGC TTGGGAGCGA GTGAAGGCGG AGTTATCGAT GTTGTTCAGG
CTCCTCCATT CGCCTGGTAA ACCCATGAAA GTGGACATCA TTCTAGCCCA TCTCAATGCA
CTACTAACCG AGTTGAACAG CGCTTATTTC GAAGGTCATC ATCAGCCAAC ACCTGCTAAT
GCCAAGTTGT CAAAATATAT AGCCTTTACA CTGGCCGTAG AAACACAACT CACCCAGCAG
CATGATGTGC ATACGATTGC TCAACAATTA GCGATGACTC CGAATAGCCT CTACGGTGTT
GTTAAAGAGT TTTCCGGCCA TTCGCCTAAA GAATGGATAA TCAATCGCCT TATTCAGGAA
GCGCAACGGA AGCTGCACTA CGGCACCTTG TCGGTTAAGG AACTGGCTTA CGAGTTAGGC
TTTAACGATC CGGCTTATTT CTCACGGCTG TTTAAGAAAA GGACAGGTAA GAATATTACT
GACTTTCTAG CTGAGGAGCA TCGTTTGTCC AATCCTTGA
|
|---|
| Protein sequence | MLETKGLLNQ IKHHDRLPIT VNQNCAIPLP EAVWPKLLQP HQLAYYYLVF VDQGLETFQL
DGQKLTIANR QAVFGTPNQI FAHPAPNKDT QQYKIGFDEH TLALLPQAFP FLVNPLNRNT
LMFEPDAWER VKAELSMLFR LLHSPGKPMK VDIILAHLNA LLTELNSAYF EGHHQPTPAN
AKLSKYIAFT LAVETQLTQQ HDVHTIAQQL AMTPNSLYGV VKEFSGHSPK EWIINRLIQE
AQRKLHYGTL SVKELAYELG FNDPAYFSRL FKKRTGKNIT DFLAEEHRLS NP
|
|---|
| |