| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2730 |
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| Symbol | |
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| ID | 8726480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3301556 |
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| End bp | 3302899 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003387544 |
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| Protein GI | 284037614 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00424565 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAA TAATCATTAG TCTGCTGAGC GCCCTTTTGC TCACGGGATG CCATCAATTC
TTAACCGTAC AACCGGATTT ACAGGTCGAT CAATCGCAGG CGATCACCAA CGCCAGTACG
GCCGAAGCCG CTGTTAACGG CCTTTACAAC CGGCTGGGTA GCGATGGGTA TTACGGGTCC
AACTTCCAAT CCCTCGCCTA CCTGTCGGGT GGCGATATTC AGTGGACAGG TTCACAGGGG
GCTCCGCAGG AAATTACGGC CCGCAAACTC ACCGCTGACA ATGGCTATGT GAGTTCAGCC
TGGTCGGCCA TTTACCGAAC CATTCTTCAG GCAAACTACC TGCTGGAAAC CGTCCCGAAC
ATCACGGACC CGCAATTGAC CGCAGACCGT AAAAACCAGA TTCTGGGCGA AGCCTATGCC
ATACGGGCGT TGTCGTACTT CGATCTGGTT CGAGGCTGGG GCGGTGTTCA ACTGATTTTA
AAGGCCACGC GCACCCCTTC CGACAACACG AATATTCCCC GCAACAGCGT CGACGAAACC
TATGCACAGG TATTGAAAGA CCTCACCGCT GCCGAGCCGC TTTTGAGTGC AACGACCAAC
CGCAATAAAA TCACCCGTAA GACCGTCTGG GCCATTCGGG CGCGGTATCA CCTGTATCGG
CAAGAGTGGG AACAGGCCGA GACGTATGCC AGCAAGCTTA TTGATGATGC GGCCAATTAC
AAACTGGCGA AGCCTTACAG TGCGTTTTTC GCGAACAATG CAGCCGCTAC ACCCGAGTCT
GTCTTCGAGA TTGCTTACAC CAATTCGTTC AAGAACGGGC ATTACAACTG GTGGCTTCCT
CCGGCGCTGA GCGGCCGACG CGAGTGGGCG CCGAACGCTA ACCTGGTCGC TTTGCTCAAC
GACCCCAACG TAGGAGGTAA CCGTAAAGAG CTGATTGCCC AAACGAGTCC TCCGGGCAAC
TTGTGGTACG GCAAACTCTA TTACCGCACC CCGCTCGGCA CCGACCCGTC CTACATCATA
CGAATAGCCG AGTTGTACCT GATCCGGTCC GAAGCCCGTG CTCAGCTGGG CAAAACAGCC
GCTGCCCTCG CTGACTTGAA CGCCGTTCGT GACCGGGCGG GTGTGCCTGC TTCAACCGCA
GCGACGAAAG ATGCCTTGTT ACTAGCAATC GAAACCGAAC GGCAGGTGGA GTTCCCCTTT
GAAGCAGACC GCTGGTTCAA CCTAATCCGA ACAGGACGGG TGGCGACCGT GCTGGGTATC
ACCGACGCAA CTAAATATGT GCTGCCCGTG CCGAATAGTG AAATCCTGGC CGATAAGGCG
CTGACGCAGA ATCAAGGGTA TTGA
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| Protein sequence | MKKIIISLLS ALLLTGCHQF LTVQPDLQVD QSQAITNAST AEAAVNGLYN RLGSDGYYGS
NFQSLAYLSG GDIQWTGSQG APQEITARKL TADNGYVSSA WSAIYRTILQ ANYLLETVPN
ITDPQLTADR KNQILGEAYA IRALSYFDLV RGWGGVQLIL KATRTPSDNT NIPRNSVDET
YAQVLKDLTA AEPLLSATTN RNKITRKTVW AIRARYHLYR QEWEQAETYA SKLIDDAANY
KLAKPYSAFF ANNAAATPES VFEIAYTNSF KNGHYNWWLP PALSGRREWA PNANLVALLN
DPNVGGNRKE LIAQTSPPGN LWYGKLYYRT PLGTDPSYII RIAELYLIRS EARAQLGKTA
AALADLNAVR DRAGVPASTA ATKDALLLAI ETERQVEFPF EADRWFNLIR TGRVATVLGI
TDATKYVLPV PNSEILADKA LTQNQGY
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