Gene Slin_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2716 
Symbol 
ID8726466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3285738 
End bp3287183 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content50% 
IMG OID 
Productbeta-lactamase domain protein 
Protein accessionYP_003387531 
Protein GI284037601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.521064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAT CATTTCTGGG GGCGGCCCGG CAGGTAACTG GCAGTATGTA TCTGCTGGAA 
CTGGAGGATG ATTACCGCAT CCTGATTGAC TGTGGTTCCG ATCTGGAGCG TTCCACGCCA
CGAGAGGCCA GTTCGAACGG TCAAACAACC CCCGCCGTTA CTCATCCGGG ATTTTTTCCG
TTTGAGGCAT CAAGCATAAA TCTGGTACTG CTGACGCACG CGCACGTAGA CCACTCCGGG
AACCTGCCCA ATCTGTTCCG TGAAGGATAT GAAGGACAGA TACTATGCAC CGAGCCTACC
TTCGCGCTCA CCAATGTGTT GCTGAAAGAT GCGGCATCAT TGAACCAAAA GCGCATTAAC
GAACTGAATG CCAGCAAAAA ACAGCGGGTA AAGGATCGAC AGGTACAGAT GCAAAAAGAC
CTGTTTTTAG ATAAGCAGGT TCGCGAAACC ATGGAGAATG TAGTTCCCAT TGGATTCAAT
CGTAAATTTA AAGTAGCGGA CGGTGTCGAT GTAACGTTTA TTCCGGCGGG ACACCTGCTC
GGAGCTGCCC ACATCGTTAT TAACGTAGTG GAGAACGGCG AACGAAAAAG TATATGTTTT
TCGGGCGATA TTGGCCGTAA AAACTACCCC CTTCTGGTCG ATCCGGCAAC GGTGCCGCCG
GTCGATTACC TGGTCTGCGA AAGCACCTAT GGCAATCGGC TTCATGAACA CCTGATGACG
CCCGAAGATG CGCTGGCCGA TATTATCCAG CGAACCTGCA TCGACATTCC CGGTCGACTC
ATTATTCCGT CCTTTAGTGT AGGCCGCACG CAGGCGTTAC TTTACACCCT CAACCGGCTA
TATACCGAAC GTAACTTTCC GCCTATCAAG GTCTTTTCGG ATAGCCCGAT GGGTTTTGAA
AGCACCAAGA TCTACATGCA GCACATAAAA ATGCTGAATG CGGAAGCCAG GGAGTTCTAC
AAGGAAAATG AAGCGCTGTT CGATTTTCAG AACTTTGAAT TTCTAGAATC GGCAAAAGCC
AGTAAAGCCG TATCCAACTA TGGTGAACCT TGCATCATCA TTTCCTCGTC GGGTATGGTG
CAGGGTGGTC GGGTTGAATA CCATGTTGCT GAGAACATCA GTAATCCCTA CGCCACTATC
CTGATCATCG GCTATTGTGC CGAAGGAACT TTAGGGTGGC GTTTGCTGAA TGGGCAGCAA
ACCCTCAGCA TAAAAGGCAA AGACCACCAG GTGCTGGCCA ATGTTGAAAA GATCGACGTG
TTCAGCGGTC ACGGCGACCG GAATGATCTG ATTAACTTTG TGAGCATGCA ATCACCCGAA
ACGCTCCGGA ACATTTTTCT GGTTCACGGC GAATACGAGA GCATGGAGTC GTTCAAAGCC
ACGCTGGCTG AAGAAGGCTA TCCGCAGGTG ATTATTCCCA AAAAAGGCGA AAGCTTTGAA
CTTTAA
 
Protein sequence
MKLSFLGAAR QVTGSMYLLE LEDDYRILID CGSDLERSTP REASSNGQTT PAVTHPGFFP 
FEASSINLVL LTHAHVDHSG NLPNLFREGY EGQILCTEPT FALTNVLLKD AASLNQKRIN
ELNASKKQRV KDRQVQMQKD LFLDKQVRET MENVVPIGFN RKFKVADGVD VTFIPAGHLL
GAAHIVINVV ENGERKSICF SGDIGRKNYP LLVDPATVPP VDYLVCESTY GNRLHEHLMT
PEDALADIIQ RTCIDIPGRL IIPSFSVGRT QALLYTLNRL YTERNFPPIK VFSDSPMGFE
STKIYMQHIK MLNAEAREFY KENEALFDFQ NFEFLESAKA SKAVSNYGEP CIIISSSGMV
QGGRVEYHVA ENISNPYATI LIIGYCAEGT LGWRLLNGQQ TLSIKGKDHQ VLANVEKIDV
FSGHGDRNDL INFVSMQSPE TLRNIFLVHG EYESMESFKA TLAEEGYPQV IIPKKGESFE
L