| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2628 |
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| Symbol | |
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| ID | 8726373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3179174 |
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| End bp | 3179878 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | regulatory protein GntR HTH |
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| Protein accession | YP_003387444 |
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| Protein GI | 284037514 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.404376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.597064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTACG TACATAGCCA GAATGATTTC AAGTTGAATG AGAACCTGAC GTTAGTCGAC
AAAGTGGAGA CGGACCTGCT TGACTTTTTC AACGACAAGC AGTTTAAAGC GGGCGATGTA
ATTCCGAAGG AGATCGAACT AGCGGCTCAG TTGGGTGTGA GCCGCACAGT TCTGCGCGAA
GCGTTGTTAC GGCTGCGGAT GCGCGGCATG CTCGATACCA AGAAAAAACG GGGTACGGTC
ATTACCAATC CTGACCTGCT CTCGCTGATT GAAAAAACAT TGTATCCCGG CATTCTGGAC
AACGCCACCC TGCGCGATAT TTTCGAGTTA CGCATGGTTA TGGAGATCGG TATGGGCGAT
CTGATTTTTG AGCGCGTAAC TCAGAATGAC ATTGACGAAC TCTACGCTAT CGTTGCCGAT
GAACCGGTCA ATACCGAAGA CATGATCTTC GATTCGGAAC AGGAAATTCG CTTCCATGGC
AAGTTGTACG ACATTACCGG TAACGAAACG CTGCGCCGGT TTCAGCGCAT GCTGCTACCC
ATTTTCAAGT ATGTGCACGA AAGCGGCATC CTGAAAAAAC AGGTGCAGCA AAAGAAGTTT
GTCTCCCACC GGGGCATTGT CGACGTTATC CAGCATGGTA CGCCCGAGGC CTTCCGAAAC
GCCATGCGCA ACCACTTCGA GAATCACTTT CAACGCTTAT TCTAA
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| Protein sequence | MDYVHSQNDF KLNENLTLVD KVETDLLDFF NDKQFKAGDV IPKEIELAAQ LGVSRTVLRE
ALLRLRMRGM LDTKKKRGTV ITNPDLLSLI EKTLYPGILD NATLRDIFEL RMVMEIGMGD
LIFERVTQND IDELYAIVAD EPVNTEDMIF DSEQEIRFHG KLYDITGNET LRRFQRMLLP
IFKYVHESGI LKKQVQQKKF VSHRGIVDVI QHGTPEAFRN AMRNHFENHF QRLF
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