Gene Slin_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2600 
Symbol 
ID8726345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3144262 
End bp3144870 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content43% 
IMG OID 
Productresponse regulator receiver protein 
Protein accessionYP_003387417 
Protein GI284037487 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.085671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTAT ACGCTATGGT CAGCAATCAC CTATTGTGTA CGCTTACTAA ATCGTATGTT 
TTGCCTTATA TCAATACAAC TAGTTTCAAC GTTACTCAAT GTAACGTCAA CTACCTACCG
GCAAACTTAA ACATGAATCA AATTTCCTGT GCGTGCGTCT TTCACGTCGA CGACGATGAA
GACGATCGTT TTTTGTTGCA ACAAGTATTT CGTCAGTATA GTCCAGCGTG TGAAATTAAA
CCGCTGGCCA ATGGCGAGGA ACTACTGGAG GCTTTAGCAA CTGCTCCTGT CCTACCCTCG
CTAATTCTGT TAGATTTGAA TATGCCCATT ATGGGTGGGT TTGAAGTACT ACGCTCTATC
CGTCAGGAGC CCAGATACGA CTCTATCCCG GTCGTTGTGC TAACAACGTC TGATCAATTG
ACAGATCGTC AGATGGCTTC AGAATTAAAA GCTGATGGAT TTATTCCTAA ACCACCTACG
CTGAAGCAAT TAAATCAGAT TGTTCTTGAG TTAAGACAAA ACTGGCTAGA GGGTAAATGT
GCAGCTATTA CGCAACCTCT TCATACGCCC CCAACCGACA TACCTGCAAA GTCTATATCT
GTCAAGTAA
 
Protein sequence
MALYAMVSNH LLCTLTKSYV LPYINTTSFN VTQCNVNYLP ANLNMNQISC ACVFHVDDDE 
DDRFLLQQVF RQYSPACEIK PLANGEELLE ALATAPVLPS LILLDLNMPI MGGFEVLRSI
RQEPRYDSIP VVVLTTSDQL TDRQMASELK ADGFIPKPPT LKQLNQIVLE LRQNWLEGKC
AAITQPLHTP PTDIPAKSIS VK