Gene Slin_2586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2586 
Symbol 
ID8726331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3126154 
End bp3127308 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content52% 
IMG OID 
Productglycosyl transferase group 1 
Protein accessionYP_003387403 
Protein GI284037473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.687638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTT TAAATATCTG CGCTTACACC TGGCAATCGG GTGGTCCTCC CAAGATTATT 
TTCGACCATA CCGAAGTTGT CCTCCGCTAT GGCCATCAGG TAGACATTCT GAGCCCTGTT
TCGCCCGGCG AAAAGCCCTA TCCTGTTCCA GAAGGGGCAC GGCTGATCTT ATGTCGGCGG
ACCCCTGTTA TCAATAAATT CTTCCGTGAA TTCTCGATTG AGCTGTATCA GTATCTAAAA
AAACACGCTC ACGAGTACGA TATTATTCAT TGCCACGGTC TTTGGCATTT CGGCACGCTC
GCCCCCTTCA TGATTGACCG GACAATAGCC AAAGTGATTA CCGTTCATGG GGTGCTGGAT
CGGTGGGTGT ACGCGCACAA CAACTGGAAG AAGCAGTTAA TGGACTCACT GGCCCAGAAA
GCATATCTAC AGCGGGCTGA TCTGGTACAG ATCAACAACA CCGACGAGCA GGAAGATGTG
CTACGCTACC TCGGGCATGT TCATCCGAAC CTGGTCATCA TCCCTAACGG GGTTAAGATG
AGCGATTTTG CTACGCTTCC GCCCAAGGGT ACGTTCCGCC GGAAGTTTGG ACTGCCTATG
GACAAAAAGA TGGTGCTGTT CATGAGCCGT CTGAATGCAA AGAAAGGACT CGATCTACTG
CTGCCCGGTT TTCGGGAATA CGTTCGGCAA CACCCCGACA CGGTGCTGGC TCTGGCGGGT
CCTGACGACG GCTATGAAGC AACCGCCCGG CAGTTTATCG AGCAGCACAA CCTCGGCGAA
TCGATTCGGA TGGTAGGGAT GCTAACCGGC GACGATAAGA AAGCGGCTCT CGCCGATGCC
GATCTGTTTA CCCTTCCCTC CTATTCTGAA GGTTTTTCGA TGGCTGTACT CGAAGCTATG
GCAGCGGGCA CACCCACGCT GGTTTCCGAC CGGGTTGGCT TTGGCGAAGT GATCCGGGAA
CACAAAGCAG CCGGGCTGTT AGCCAGTTTA ACTCCGGCAA GTGTAACGGA AGGGCTGGAA
ATAGTACTTG CCGATGAACA GCTGCGCCAG AATATAGCCA GGAATGCAAC GGCCTTGCTA
AAAAAGCAAT ATGATATCGA TGTAGTTGCC AAACAACTCC TGGATGAGTA TACCAGGATT
TGCAAAAAGC CCTGA
 
Protein sequence
MRILNICAYT WQSGGPPKII FDHTEVVLRY GHQVDILSPV SPGEKPYPVP EGARLILCRR 
TPVINKFFRE FSIELYQYLK KHAHEYDIIH CHGLWHFGTL APFMIDRTIA KVITVHGVLD
RWVYAHNNWK KQLMDSLAQK AYLQRADLVQ INNTDEQEDV LRYLGHVHPN LVIIPNGVKM
SDFATLPPKG TFRRKFGLPM DKKMVLFMSR LNAKKGLDLL LPGFREYVRQ HPDTVLALAG
PDDGYEATAR QFIEQHNLGE SIRMVGMLTG DDKKAALADA DLFTLPSYSE GFSMAVLEAM
AAGTPTLVSD RVGFGEVIRE HKAAGLLASL TPASVTEGLE IVLADEQLRQ NIARNATALL
KKQYDIDVVA KQLLDEYTRI CKKP