| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2559 |
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| Symbol | |
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| ID | 8726304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3093784 |
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| End bp | 3095121 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003387376 |
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| Protein GI | 284037446 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.413213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.217288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC TTCTCAACTT ATCCTTTCTC TCAGCCCTCC TGGCCGGCTC GGCAGTAGCC
CAAACTAGCC AGCCTTTGTA CTTAAAGCAG GTACAGGATC AGGCCGTTCA GCAAAACCGG
CGGCTGAAGA TTGCCCGGTA TAAAGTCGAC GAGAGCGATT ATAAAATCGC CGAAGCCCGT
AGTCGGCTCT ATCCGCTGGT TGTTGCCAAC GGCAGCTACA CCTACAATGG CGTCACCCGC
GACCTGACCC TACCCCGAGG CTCGATTGGG GTATTGCCGG GCGCAACGCC CATTCCGCTG
CCCCAGCAGG ACCTCACGCT GTTCAAAGCA AAGCACAACC TGTTTTTCGG TAATGTGCTG
GCTTATCAAC CCCTCAGTCA GTTGAGCAAA ATCAGGGACG GCATCAAAGT AGCCGAAACC
GACGTGGCAC TGGCCAAAAC GCAGGTAAGT CAGGCAGAAC TGGCCGTACG GCAAGGGGTT
GAAAAGCTTT ATTTCGGTTT ACTGATTGCC CAGCGTCAGC AGCAGCAGGT GCAAACAACC
ATTGAACTGA CTCAGGCCAA ATTGTACGAT GTAGAAAGCG CACTCCTGGC CGGAAAAACC
GACCCCGTCA ATAAAGTTGG GCTGCAAGCC GATCTGGCCA ATCAGCAGCA GCAGTTACTC
CAGCTCACGA ATCAGGTGGA AGATTACACC GCCGATTTGA ATGAGTTACT CGGCCAACCC
GCCGAAACGC CGTTGAGCCT AAGCCCCGTA ACAGATTCAC TGCCATCGCT ACCGCCATTG
GCTACATTTC TTGAGGGCGC TAAAAGCGGG AATCTGGAGG TTCGGCAGGC CGACCAAACC
AGTCAGAAAG CCGCGCTTGG TGTGCAGGCG GCTCGCAAGG ATTATATACC GACGGTTGGT
GCGCTAGGTG GCTATTTGTT CCAGAATGTA ATTTCGGACC TGCCCCAGAG CAATTACTTC
GTGGGACTTC AACTGAGCTA TAACATCGTT GACTTTGGTC GGCGTCGGTC TACGCTGAAC
CAGCGACTGT CGCAGGAAAA ACAGGCCAGT GAAAATGTTC AGTATACGCG GGAACACATT
GCCGGAGAAG TGCAAAAAGC CCATCGAAAA GCCCGTCAGG CGCAGGCATT GTTACCCATT
GCCGCCCAGG CTGCTCAATA CCGGCGCGAC GAGCTAAAGC TTAAAACCGA CCGACTCGCG
GCCGGACTGG TCTTGAAGCG CGACGTGCTG GAAACACAGG CCGCGCTGGC AAAGGCCGAA
GCAGATCTGT ATTCGGCCCA ACTGGCCTAC CGCCTGGCCC TGTCCGATCT GGCAGCCTTG
ACGGGTGTTA GCCGGTGA
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| Protein sequence | MNKLLNLSFL SALLAGSAVA QTSQPLYLKQ VQDQAVQQNR RLKIARYKVD ESDYKIAEAR
SRLYPLVVAN GSYTYNGVTR DLTLPRGSIG VLPGATPIPL PQQDLTLFKA KHNLFFGNVL
AYQPLSQLSK IRDGIKVAET DVALAKTQVS QAELAVRQGV EKLYFGLLIA QRQQQQVQTT
IELTQAKLYD VESALLAGKT DPVNKVGLQA DLANQQQQLL QLTNQVEDYT ADLNELLGQP
AETPLSLSPV TDSLPSLPPL ATFLEGAKSG NLEVRQADQT SQKAALGVQA ARKDYIPTVG
ALGGYLFQNV ISDLPQSNYF VGLQLSYNIV DFGRRRSTLN QRLSQEKQAS ENVQYTREHI
AGEVQKAHRK ARQAQALLPI AAQAAQYRRD ELKLKTDRLA AGLVLKRDVL ETQAALAKAE
ADLYSAQLAY RLALSDLAAL TGVSR
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