Gene Slin_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2546 
Symbol 
ID8726291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3074884 
End bp3075645 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content48% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003387363 
Protein GI284037433 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0757946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0982432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTCC TGCTGTCAAT TGTAATGCCG GCTTACAACG AAGAAGAAGT GATCGAAACT 
GTTGTCAAGC AGTGGACTGA TTTGTTGACC CGCCAGTTTC CTACCGAAAA TACGCGTCTG
ATAGTTGTTA ATGATGGCTC CCGCGATAAA ACGGGTGCTA TACTGGATCA AATCAAAGAC
CTCTACCCAA AACTGCTGGT TGTGCATCAA CCAAACGGTG GGCATGGTAA CGCCGTTGTG
AACGGGTATC GGCAGGCAGT GGCCCTTGAC TCAGAGTATA TATTTCAGAC GGATAGCGAC
GACCAGTTTA TTGCCGACGA CTTTGAGAAG CTTTGGGAGA AGCGGAGCAA GTCGCCATTT
ATTCTGGGCT ACCGGGAAGA GCGTTATGAC GCCCCGGCCC GCTTACTTAT TACCCGTATT
CTACGCTGGA GCATTGCCTT TATTTATGGC ACCTACATCA TGGACAGTAA TATTCCGTTC
CGACTTATCC GGGGCACATT CCTGCGGAAG TTACTGGCTC AATTACCTGA CCCAACTCCC
TTTGCACCTA ATATTTTCTT GGCCGTCATG GCTAAAAAAG CCGGATACAA TACCTTCGAC
ATTCCCATTA CCCACAAAGA GCGGGTTACG GGTACGGTTT CGATCCTGAA ATGGAAGCTG
CTGAAAGTAT GTATTCAAAG CTTCAAAGAG CTGGCTCAAT TCCGTTTTGA ATTAGGCGGT
AAAGTGAAAG CGCTGAAGAA ACCAGAACCG GTAATAGCCT AA
 
Protein sequence
MSLLLSIVMP AYNEEEVIET VVKQWTDLLT RQFPTENTRL IVVNDGSRDK TGAILDQIKD 
LYPKLLVVHQ PNGGHGNAVV NGYRQAVALD SEYIFQTDSD DQFIADDFEK LWEKRSKSPF
ILGYREERYD APARLLITRI LRWSIAFIYG TYIMDSNIPF RLIRGTFLRK LLAQLPDPTP
FAPNIFLAVM AKKAGYNTFD IPITHKERVT GTVSILKWKL LKVCIQSFKE LAQFRFELGG
KVKALKKPEP VIA