Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2546 |
Symbol | |
ID | 8726291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3074884 |
End bp | 3075645 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_003387363 |
Protein GI | 284037433 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0757946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0982432 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTCC TGCTGTCAAT TGTAATGCCG GCTTACAACG AAGAAGAAGT GATCGAAACT GTTGTCAAGC AGTGGACTGA TTTGTTGACC CGCCAGTTTC CTACCGAAAA TACGCGTCTG ATAGTTGTTA ATGATGGCTC CCGCGATAAA ACGGGTGCTA TACTGGATCA AATCAAAGAC CTCTACCCAA AACTGCTGGT TGTGCATCAA CCAAACGGTG GGCATGGTAA CGCCGTTGTG AACGGGTATC GGCAGGCAGT GGCCCTTGAC TCAGAGTATA TATTTCAGAC GGATAGCGAC GACCAGTTTA TTGCCGACGA CTTTGAGAAG CTTTGGGAGA AGCGGAGCAA GTCGCCATTT ATTCTGGGCT ACCGGGAAGA GCGTTATGAC GCCCCGGCCC GCTTACTTAT TACCCGTATT CTACGCTGGA GCATTGCCTT TATTTATGGC ACCTACATCA TGGACAGTAA TATTCCGTTC CGACTTATCC GGGGCACATT CCTGCGGAAG TTACTGGCTC AATTACCTGA CCCAACTCCC TTTGCACCTA ATATTTTCTT GGCCGTCATG GCTAAAAAAG CCGGATACAA TACCTTCGAC ATTCCCATTA CCCACAAAGA GCGGGTTACG GGTACGGTTT CGATCCTGAA ATGGAAGCTG CTGAAAGTAT GTATTCAAAG CTTCAAAGAG CTGGCTCAAT TCCGTTTTGA ATTAGGCGGT AAAGTGAAAG CGCTGAAGAA ACCAGAACCG GTAATAGCCT AA
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Protein sequence | MSLLLSIVMP AYNEEEVIET VVKQWTDLLT RQFPTENTRL IVVNDGSRDK TGAILDQIKD LYPKLLVVHQ PNGGHGNAVV NGYRQAVALD SEYIFQTDSD DQFIADDFEK LWEKRSKSPF ILGYREERYD APARLLITRI LRWSIAFIYG TYIMDSNIPF RLIRGTFLRK LLAQLPDPTP FAPNIFLAVM AKKAGYNTFD IPITHKERVT GTVSILKWKL LKVCIQSFKE LAQFRFELGG KVKALKKPEP VIA
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