Gene Slin_2501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2501 
Symbol 
ID8726245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3022194 
End bp3023183 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content36% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387319 
Protein GI284037389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0565655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.146955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATA GAGTGCAGAA CCTTATTCTG CATGACGATT CTTGGAGTGC TTACAAGGAG 
CTGTATTACT ATTTACGCAG CTGCATACAA TTTGCTGACG GTATTTTCGG AAACTTTGAA
GCATCGTTCA ATATAGAAAA ACTCCTGATT GTAATTAACG AGCTTGAAAA GAAAGAGCGT
AATTCGATTT TCCCATTTAT CGGAGCGTGG GATAATCGAT TGCTAGATTT GGCAGGCGAG
AATTTTAAAA AGCTTGCTGA GTTTAAAGAA AAAATCAGGA CTGAGTTAGT TAATCAGTGG
GTTAAAATTC CTAGCTACAA AACTGCCGAT TATTATAATG GTTTTACCAA ATTGCAATTT
GGTGAGAACG GCCTAGGAAT AGGCTTAAAA GTCTTTAGTC TTAATTACGA TTTGTGCTTT
GAAAAAATTG TTGGTCAAAA AACAGAGATA GAATTAGGAT TCGACGAATC CGGCGAGTGG
AGTTATAACA ACTTTGAGTT GTCTGATAGC AAAAGCTATA CGCTTTATAA GCTTCACGGT
TCTTTAGATT GGTATACCGA CGCCAATTCA AAAAAACTTA AACAATCGTC AGAAGCTAAT
GCTGACCCAC TGCTGATATT TGGCGAAATA AATAAGTTAC GTGCTATCGA CCCCTATTTG
TTTTATATAT ACGAATTCCG TCGTTTTTGT TTCCACCCCG ATCTGAAATT AATTATTTGT
ATAGGATATA GCTTTTCCGA TGATCACATC AATGATATTA TTTCCCAAGC AGTCAAAAAT
AAAGCTGGGA CTAAGGTCCT AACCACAATT CATCGCTCTT CTGATGACAG ACAGAATGAG
ATTTTAAAAT CACTTAAGTT AAGCACTGAA TTCAGAGATA GGGTAATATT TGAGCAGACT
GATGCAAAAC AGTTTTTAGG GCAGACCTTA TGCAAAGAAT ACCTTATTAC TAAAATTGAC
AACTCAGCAG ATACACTTTT TGCATCTTAA
 
Protein sequence
MVDRVQNLIL HDDSWSAYKE LYYYLRSCIQ FADGIFGNFE ASFNIEKLLI VINELEKKER 
NSIFPFIGAW DNRLLDLAGE NFKKLAEFKE KIRTELVNQW VKIPSYKTAD YYNGFTKLQF
GENGLGIGLK VFSLNYDLCF EKIVGQKTEI ELGFDESGEW SYNNFELSDS KSYTLYKLHG
SLDWYTDANS KKLKQSSEAN ADPLLIFGEI NKLRAIDPYL FYIYEFRRFC FHPDLKLIIC
IGYSFSDDHI NDIISQAVKN KAGTKVLTTI HRSSDDRQNE ILKSLKLSTE FRDRVIFEQT
DAKQFLGQTL CKEYLITKID NSADTLFAS