| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2473 |
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| Symbol | |
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| ID | 8726217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2989215 |
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| End bp | 2991062 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003387291 |
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| Protein GI | 284037361 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.113364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.242072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA TATTTAAAAG CTTATCGTTC TGCCTGTTTC TAGGTGTAAC GTTGATAGCC
TGTAACAGTG ATTTTCTAAA CACCAAACCC CTCGACAAAG TATCGGGGGG GGCGGTCTGG
TCAGATCAGT CTCTGGCCGA AGCCTTTGTG ACCGATGTGT ACAATGGTAT ACGTGATGGT
ATTCTCGACC AGATGAGTCT GGACTGCCAG ACCGACAACG CCTTGTACAG TTTCGGTAAG
CAGGACGTGA ACGAAGCCAA TGTCAGCCCC TCTAATACCG GTACCGTTAA AAATACGATG
GAGTGGGGTA CTGTCTACGC CCGCATCCGG GCTGCTAACA TCGCCCTGGC CAATCTGGCT
AAGCCTCAGT TCGACAATGC CACCGTTGCC GATCGGATGA AAGGTGAGAT GTACTTCATG
CGGGGTTACT TTTACAACCA GTTGCTGCGC TACTATGGTG GTGTTCCCAT CATCAAGTCG
CCCTACACCC TGGATAACCC CGATTTCACC ATCGCCCGCA ACACCTACGA GGAGTGCGTT
AACGCCATTG TGAGTGACCT GGATTCGGCG GCTATCCTGC TGAAAGGCAA GAACCTGGCT
GCTGGCCGGG CGACTCAGGG TGCGGCCATG GCCCTCAAAG CACGGGTGCT GTTATATGCA
GCCAGTGACC TGCACGACAT CCCAACGGCA AAGGCCAAGT CGAGCGTAAT TGCCAGTTTC
AGCAAGCCTG AGCTGCTGGG CTACGTTAGC GGTGACCGGA CAGCGCGCTG GCAGAAGGCC
AAGGATGCGG CCAAAGCGGT GATGGATCTG AACCAGTATG GCTACAAGCT CAACCTGACG
GCACCGGTTT CGCCAGCCGA AGGTCAGCAG AACTACATCA ACCTATACCT CTCACGCAAT
GGTGGGGAAG CTGATGGTAT CTTCCTGAAG TACTACATCC GGGCATCGTT CGATGACTGG
GGTTCGTGGT ACCCCCGCAA CAACATGCCG AACGGCTATC ATGGCTGGAC GTCGAGTCAG
CCAACCCAGC AACTGGTAGA TAGCTACGAG ATGATGGACG GCACCAAGTT TGACTGGAGC
AATCCGGCTC ACGCCAGTTC GCCTTATGAG AACCGGGACC CCCGTTTCTA CGCATCGATT
CTCTTTGACG GCGCGCAGTG GAAGCCCCGC ACACCAGACG GAGCGGGCAT CGACCCGGCT
GGTCAGATTC AAATGGGTGA GTACGAAGTT GGTAGCTCGT CGAGCCCGAC CAAGTTTTCG
GGTCTGGACA CGCGTAACAG CACCATTGAA AACTGGAATG GTACCTGGAC AGGGTATGCG
ATCCGTAAGT TTATGGACCC CGATCCAACG CTGGTGGATC AGAACATCCG TCAGGAGGTA
CCTTCTATTC AAATTCGGTT CACGGAGGTG GTGTTGAACT ATGCTGAGGC CTGCATGGCG
CTGGGTCAGG AAGAGGAAGC CAAGACTTGG CTCAACAAAA TCCGTTTCCG GGTAGGTATG
CCAGCCATTA CCGAGTCGGG TGCTGCTCTG GTGACTCGTT ACCAGAACGA GCGCAACATC
GAGATGTTAT TTGAAGATCA GCGTTTCTAC GATGTACGCC GATGGATGAC GGCACCAACG
GCTCTGGGTA GTCAGGCGAA GATCATTATC ATTACGGGCA AGCTCAAGCC GGGTAAGACT
GTAACGACTT ATAAGTACAG CAAGGAGAAC TACACCTATT CGTACAGTGT ACAGGACCTG
GGTACGGGTA AGGAGAACCG CAAGTGGGCG GATAAGATCT ACTTCCTGCC CATCAACCGG
GATGAGATGA ACCGTAATAA CAAGCTGGTT CAGAATCCGG GCTACTAA
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| Protein sequence | MKYIFKSLSF CLFLGVTLIA CNSDFLNTKP LDKVSGGAVW SDQSLAEAFV TDVYNGIRDG
ILDQMSLDCQ TDNALYSFGK QDVNEANVSP SNTGTVKNTM EWGTVYARIR AANIALANLA
KPQFDNATVA DRMKGEMYFM RGYFYNQLLR YYGGVPIIKS PYTLDNPDFT IARNTYEECV
NAIVSDLDSA AILLKGKNLA AGRATQGAAM ALKARVLLYA ASDLHDIPTA KAKSSVIASF
SKPELLGYVS GDRTARWQKA KDAAKAVMDL NQYGYKLNLT APVSPAEGQQ NYINLYLSRN
GGEADGIFLK YYIRASFDDW GSWYPRNNMP NGYHGWTSSQ PTQQLVDSYE MMDGTKFDWS
NPAHASSPYE NRDPRFYASI LFDGAQWKPR TPDGAGIDPA GQIQMGEYEV GSSSSPTKFS
GLDTRNSTIE NWNGTWTGYA IRKFMDPDPT LVDQNIRQEV PSIQIRFTEV VLNYAEACMA
LGQEEEAKTW LNKIRFRVGM PAITESGAAL VTRYQNERNI EMLFEDQRFY DVRRWMTAPT
ALGSQAKIII ITGKLKPGKT VTTYKYSKEN YTYSYSVQDL GTGKENRKWA DKIYFLPINR
DEMNRNNKLV QNPGY
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