Gene Slin_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2424 
Symbol 
ID8726168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2927511 
End bp2928479 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content55% 
IMG OID 
Productbeta-lactamase domain protein 
Protein accessionYP_003387243 
Protein GI284037313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.238173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTC AACTTGAACT GGACACGCCA GTGGATACCG GCGGTAAAAC ACCCTATGAT 
GTTACTGCCG ATGTAGCCGG TATTAAAACA TTGTTTGTAA ACGTATTTTT CATTGGCACG
CCCGGTTATG GCAACCATTG GGTATTGGTG GATGCCGGTT TTATGGGCTA CGCCAGCTCG
ATAAAAAAAC GGGCAGAGGA GTTATTTGGC CCCGGTACCC AACCCGACGC CATTATCCTG
ACGCACGGCC ATGCCGACCA TGTTGGCTCG CTTAAGACGT TGCTGGAAGG GTGGAATGTG
CCGGTGTACG CTCACAAACT TGAGTTGCCG TTTTTGCAGG GTAAATCGAG CTATCCGCCA
CCAGATCCGG CCATTGGCGG GGGCGGCATG TCGTATATGT CGTGGGTGTT TCCCATTGGC
CCAATGGACT TTGGCGACCA GATAAAAGCG CTTCCAGATG ATGGAAAGAT TCCTGAATTA
CCCGACTGGC GGGCAATTCA CACGCCAGGT CATGCACCGG GCCACATTTC CCTGTTTCGG
GATAAGGACC GGACGCTCAT TGCCGGCGAT GCCTTTGTAA CGACAAACCA GAACGCCATT
ACGGCGGTGG CTACCCAGCG CGAGGAGTTT CATGGGCCAC CGGCCTACTT CACCTGCGAC
TGGGAAGCGG CCAAGGAGTC GGTGCAGAAG TTGAATAATC TGAATCCGGC AGCTGCCGGA
ACAGGGCATG GCGTATCGGT GCGGGGCCTC GACCTGAAAT TAGGGTTAAA TAAACTGGCG
CACGAGTTCG AAGCCCGCTC CATTCCGTCG GAAGGCCGGT ACGTGAAGCA ACCCGCCGTT
ACCGACGAAA ATGGCATTGT GGACATGCCT GCACCGACCT CATTCCACGT AGCCAGGGTA
CTCGGACTTA GCATATTGAC CGGCGTGGTT GGATACGCGA TCTGGTCGGT CGTGAAGCAG
AACGACTAG
 
Protein sequence
METQLELDTP VDTGGKTPYD VTADVAGIKT LFVNVFFIGT PGYGNHWVLV DAGFMGYASS 
IKKRAEELFG PGTQPDAIIL THGHADHVGS LKTLLEGWNV PVYAHKLELP FLQGKSSYPP
PDPAIGGGGM SYMSWVFPIG PMDFGDQIKA LPDDGKIPEL PDWRAIHTPG HAPGHISLFR
DKDRTLIAGD AFVTTNQNAI TAVATQREEF HGPPAYFTCD WEAAKESVQK LNNLNPAAAG
TGHGVSVRGL DLKLGLNKLA HEFEARSIPS EGRYVKQPAV TDENGIVDMP APTSFHVARV
LGLSILTGVV GYAIWSVVKQ ND