| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2398 |
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| Symbol | |
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| ID | 8726142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2891147 |
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| End bp | 2893945 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003387217 |
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| Protein GI | 284037287 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAC TTCTTCTACT CCTCCTCATT TGCCTTCTCA CTGTCATTGA CACCCTTGCC
GGAACAATCC GTGGACGGGT CATTGATGCA ACCACTGGCC AAACCGTTAT TGGGGCTACG
GTACAAATTG AAAACACAAA CTACGCTACG GTTTCGGGGC TCGATGGCTC GTTCCTTATC
AAAAGTATTC CCGCTGGGTC CTATAAAATT CGAATAAGCT ATGTGTCTTA CCAGACACTC
TCCCGTAATG TTGTTCTGAC AACTAACGAC GAGACGGTAA CGATTGACTT GCCCCTCGAA
ACGGAAACCA GCCGGGAGAT TACCGAAGTG ACCGTAAAAG CAAAGCGAGA GGGGTCAAGT
GACCTGACCG CCCGCGACCT CGAACGGAAT GCGCTACAGG TTACCAACAT CGTTTCGGGA
CGGACCATCG AACTATCGCC CGACTTGACG GTCGCCAATG TCATTCAACG CGTATCCGGT
ATTTCGATTG AGCGGAACAG CAATGGCGAT GGGCAGTATG CCATTCTGCG GGGTATGGAC
AAACGCTACA ATTACACGCT CGTTAACGGA GTTAAAATTC CAAGCCCCGA CAATCGCTAC
CGGTACGTAC CACTCGATAT TTTCCCGTCC GAACTCCTCG ACCGGCTGGA AGTGTACAAG
GCCCTGACCC CGAGTATGGA AGGCGACGCC ATTGGCGGAG CTATCAACAT GGTCATGAAA
GACGCGCCGG ATCGCCCTAC GGTTCTGGCC AATCTGGCTA CGGGTTATAG TGAGCTGTTC
ATGAACCGGC CGTTTGTTCG TTTCGATGCA GCACAAATCA ACAGCAAGTC GCCCTATGAG
CAGTTTGGTA ATCAATACAG CACCAAATTT TCGGACTTCG GCAAAGGCTC ATCCACTTAT
ACTACCCAAA GTCCACCGCC CAACCTGATT GGTAGCTTCG CCATTGGTAA CCGCTTCCTC
GACCGCCGTT TCGGTATCAT GCTGGCGGGT AGTCTGCAAA ACACGTACCG GGGCAGCAAC
AGCCTGTTTT TCAATGGCGA TGTAGTTGAT ACACTGCGCG GCATTACCCT CAACAAGCAA
AGTGAGCGGC AGTATTCGGA GTTGCAAACG CGGTATGGCC TGCACGCTAA AATGGACTTC
CGCGTCAACC GCGACGGCGG ACCGGAAAAC AATAAAATCC AGTGGTTCAA CGCCCTGATC
AGCCTGACCA ACCAGCAGAT ACGGGAAACG AAATCGACGG AACTGGGGAT CGGTGGCTTC
GACCCGGCAC TCGGTAACGC AACCCTAGGC TTTGAAACCC GCTCCCGACT TACGAAACAG
AAAATTTATA CCAGCACCCT TCAGGGTACA CATCAGCTGA CGCCCATTTT TGGCGTAACC
TGGTCGGCGG TTTATTCGCT GGCTACCAAT GAAGTACCCG ATCAAACGAA CATCTCTCTG
CTGGGTATCC GCACCAATTT TGTGGAGACC CGAACAACCG TTCAGGATGG AGCCCGCCGA
TGGGAGCATA ACTCGGATAC TGATCTGGCC GGATACCTGA ATCTGAACCT GAAAACAACC
CTGGCCGGTA TTGACGTTGA GTGGATGGCA GGTGGACTTT TCCGGGATAA GCAGCGTACT
AATTTTTACA ATAACTACAC CATTCGGCCA GCGAATCCCT TTGCCAAATA CGGTGTCGAC
TTCACCAGCT ATAACCAGAT CGTTTATTCC GTGCAGAATC CACTGGGTTC GGTAGCTTCG
GCGCTCAACT ACGACGCCAC TGAAAAGACC ACCTCGGGCT ATCTGCAATT TCGCACGACC
GACCAGCCGC TCGAAGTAAC CGGCGGGGTT CGTATCGAGC ATACCGATCA GGGCTACGCC
ATGAAATTCC CGATTGGGGA AGACCAGCCC ACCGGCAGCC AGATTTACAC CGATGTTTTA
CCGAGCCTGC ACTTCCGGTA CCGTCCCAAC GAACGCACGA ACTGGCGGTT GTCGTACTTC
CGGTCGCTGA ACCGGCCTGG CTTCTTTGAA ATCGTACCGT ACCGAATCGT CAACGAAGAA
TACCAGGAAC GCGGCAACCC CAATCTGAAA CGTGCCCTCG CCAATAACGT CGACCTGCGG
TACGAGTTTT TCCCCCGACC GCTGGAGCAG TTCATGGTGG GCGCGTTTTA CAAAGGTATT
CAGGACCCCA TTGAGTACAC GCTCCAGAAA GACGCCATTC GTGGTCAGGA TCTGTATTAT
GGACCGGGTA ACTTCGGCAA TGCAACCAAC GTTGGTCTCG AACTCGATGC CATCAAATAC
TTCCGGCAGT GGGGTATCAA GGCGAATTAT ACCTACACGA ATTCGAGCAT CACAACGCCC
AAATCGAAGC GAATCAGAAA CGCACAGGGC GATTTGCAAA CGATCACCGT TAATCAGACC
CGATCGCTCT ATGGCCAGTC GGCGCACGTA GCCAACCTCT CTTTGCTCTA CAAAAACAGC
GAACACGGGC TGGATGGCCA ACTCGCGGCC AGTTATACCG GCCGTCGTAT CAATACAGTA
TCACAGTTTG TCGACAACGA TCTGTACCAG AAAGCTTTTA TCCAGATGGA TGCCTCAGTC
GAAAAACGGC TGGGCAAAGC CAGCGCAGGC AAGTCTTCAT CGGGTTTCCT GCTGTTCATC
AAAGCCAACA ACCTGCTCAA TACGCCCACG GAGATTTTCA TCAACAACCA AAGTAGCCGG
AATTCGGATG TGCCGAATCA GGATGTGTCG GGCAAGACGC TCATCCGACG TGATTTTTAC
CAGCGCTCGT ATGTACTGGG CGTACGCTAT AAACTATAA
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| Protein sequence | MNRLLLLLLI CLLTVIDTLA GTIRGRVIDA TTGQTVIGAT VQIENTNYAT VSGLDGSFLI
KSIPAGSYKI RISYVSYQTL SRNVVLTTND ETVTIDLPLE TETSREITEV TVKAKREGSS
DLTARDLERN ALQVTNIVSG RTIELSPDLT VANVIQRVSG ISIERNSNGD GQYAILRGMD
KRYNYTLVNG VKIPSPDNRY RYVPLDIFPS ELLDRLEVYK ALTPSMEGDA IGGAINMVMK
DAPDRPTVLA NLATGYSELF MNRPFVRFDA AQINSKSPYE QFGNQYSTKF SDFGKGSSTY
TTQSPPPNLI GSFAIGNRFL DRRFGIMLAG SLQNTYRGSN SLFFNGDVVD TLRGITLNKQ
SERQYSELQT RYGLHAKMDF RVNRDGGPEN NKIQWFNALI SLTNQQIRET KSTELGIGGF
DPALGNATLG FETRSRLTKQ KIYTSTLQGT HQLTPIFGVT WSAVYSLATN EVPDQTNISL
LGIRTNFVET RTTVQDGARR WEHNSDTDLA GYLNLNLKTT LAGIDVEWMA GGLFRDKQRT
NFYNNYTIRP ANPFAKYGVD FTSYNQIVYS VQNPLGSVAS ALNYDATEKT TSGYLQFRTT
DQPLEVTGGV RIEHTDQGYA MKFPIGEDQP TGSQIYTDVL PSLHFRYRPN ERTNWRLSYF
RSLNRPGFFE IVPYRIVNEE YQERGNPNLK RALANNVDLR YEFFPRPLEQ FMVGAFYKGI
QDPIEYTLQK DAIRGQDLYY GPGNFGNATN VGLELDAIKY FRQWGIKANY TYTNSSITTP
KSKRIRNAQG DLQTITVNQT RSLYGQSAHV ANLSLLYKNS EHGLDGQLAA SYTGRRINTV
SQFVDNDLYQ KAFIQMDASV EKRLGKASAG KSSSGFLLFI KANNLLNTPT EIFINNQSSR
NSDVPNQDVS GKTLIRRDFY QRSYVLGVRY KL
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