Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2391 |
Symbol | |
ID | 8726135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2883933 |
End bp | 2884841 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_003387210 |
Protein GI | 284037280 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0570975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTACTG AAGAACCCGT TATTATTCCC CAAAATCGCC CCTTGCTGGC GTGGGTATTG TTGTGTGCGC TGGCATTGGT ATGGGGCAGC TCATTCATTC TCATCAAGCG AAGTCTGGGG GCTTTCCCGC CCGAACAGGT AGCCGCCGGT CGGCTGGTAT TTGCCCTCCT GTTTTTCAGC CCTTTTCTGG CCAGGCAAAG CCAGCAGGCC GACATTCGGG TTATGGTCCG GCATCGCTGG GTGGCGTTGC TGGCATCGGC CATTATCGGG TTCGTGATCC CGGCATTTCT TTTTGCCGAA GCGGGTGCCC ACCTCAACAG TTCGCTGGCG GGTGCACTTA ACTCCCTGAG CCCTCTGTTT ACGCTTATTC TGGGGGCCGT CTTCTTCGGT CAGGCGCTCA AGCTAAAGCA GGTGGTCGGC ATTTTGCTCG GGCTGGCAGG GTCATTGCTG CTGGTGTTTT TCAGTGCCAC CGGCTCCTTT CAGATCAATG GCTACGCACT TTTGGTCGTG CTGGCAACCA TCTGTTATGG CTTGAATACC AACCTGATTG GCCGGTTCCT GAGCCATTTG CCCGCTCTGG TTTCAACGGC CTGGCTCTTT GCCTTTGCCG GGCCCATCGC CTTGCTTACG CTGATACCTA CCGATTTTTT TAGTCGGGTT GTCGATGCTA ACAGCAACTG GTCGTTGTGG GCGCTGGTGA CGCTGGGGGT ATTTGGCTCG GGCCTGATGT CAATCTTCTT CAACCGGGTC ATGCAACTGG CCTCGCCTTT ATTTGCGGCC TCGGTCACCT ACCTTATTCC CATTGTGGCC CTCATGTGGG GCGTGCTGGA TGGCGAAACA ATCTACCTGG TGCAATTTGC CGGGATGGGT ATCTGCTTAA TCGGTATCTG GTTAGTAAAT AAATCGTAG
|
Protein sequence | MTTEEPVIIP QNRPLLAWVL LCALALVWGS SFILIKRSLG AFPPEQVAAG RLVFALLFFS PFLARQSQQA DIRVMVRHRW VALLASAIIG FVIPAFLFAE AGAHLNSSLA GALNSLSPLF TLILGAVFFG QALKLKQVVG ILLGLAGSLL LVFFSATGSF QINGYALLVV LATICYGLNT NLIGRFLSHL PALVSTAWLF AFAGPIALLT LIPTDFFSRV VDANSNWSLW ALVTLGVFGS GLMSIFFNRV MQLASPLFAA SVTYLIPIVA LMWGVLDGET IYLVQFAGMG ICLIGIWLVN KS
|
| |