Gene Slin_2391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2391 
Symbol 
ID8726135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2883933 
End bp2884841 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003387210 
Protein GI284037280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0570975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACTG AAGAACCCGT TATTATTCCC CAAAATCGCC CCTTGCTGGC GTGGGTATTG 
TTGTGTGCGC TGGCATTGGT ATGGGGCAGC TCATTCATTC TCATCAAGCG AAGTCTGGGG
GCTTTCCCGC CCGAACAGGT AGCCGCCGGT CGGCTGGTAT TTGCCCTCCT GTTTTTCAGC
CCTTTTCTGG CCAGGCAAAG CCAGCAGGCC GACATTCGGG TTATGGTCCG GCATCGCTGG
GTGGCGTTGC TGGCATCGGC CATTATCGGG TTCGTGATCC CGGCATTTCT TTTTGCCGAA
GCGGGTGCCC ACCTCAACAG TTCGCTGGCG GGTGCACTTA ACTCCCTGAG CCCTCTGTTT
ACGCTTATTC TGGGGGCCGT CTTCTTCGGT CAGGCGCTCA AGCTAAAGCA GGTGGTCGGC
ATTTTGCTCG GGCTGGCAGG GTCATTGCTG CTGGTGTTTT TCAGTGCCAC CGGCTCCTTT
CAGATCAATG GCTACGCACT TTTGGTCGTG CTGGCAACCA TCTGTTATGG CTTGAATACC
AACCTGATTG GCCGGTTCCT GAGCCATTTG CCCGCTCTGG TTTCAACGGC CTGGCTCTTT
GCCTTTGCCG GGCCCATCGC CTTGCTTACG CTGATACCTA CCGATTTTTT TAGTCGGGTT
GTCGATGCTA ACAGCAACTG GTCGTTGTGG GCGCTGGTGA CGCTGGGGGT ATTTGGCTCG
GGCCTGATGT CAATCTTCTT CAACCGGGTC ATGCAACTGG CCTCGCCTTT ATTTGCGGCC
TCGGTCACCT ACCTTATTCC CATTGTGGCC CTCATGTGGG GCGTGCTGGA TGGCGAAACA
ATCTACCTGG TGCAATTTGC CGGGATGGGT ATCTGCTTAA TCGGTATCTG GTTAGTAAAT
AAATCGTAG
 
Protein sequence
MTTEEPVIIP QNRPLLAWVL LCALALVWGS SFILIKRSLG AFPPEQVAAG RLVFALLFFS 
PFLARQSQQA DIRVMVRHRW VALLASAIIG FVIPAFLFAE AGAHLNSSLA GALNSLSPLF
TLILGAVFFG QALKLKQVVG ILLGLAGSLL LVFFSATGSF QINGYALLVV LATICYGLNT
NLIGRFLSHL PALVSTAWLF AFAGPIALLT LIPTDFFSRV VDANSNWSLW ALVTLGVFGS
GLMSIFFNRV MQLASPLFAA SVTYLIPIVA LMWGVLDGET IYLVQFAGMG ICLIGIWLVN
KS