Gene Slin_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2388 
Symbol 
ID8726132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2881582 
End bp2882316 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content52% 
IMG OID 
Producturidylate kinase 
Protein accessionYP_003387207 
Protein GI284037277 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0822342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGC AAACAACGTA TAAACGCATC CTGCTCAAGT TGAGCGGGGA GGCTCTGGCT 
GGGCCTAACG GATACAATAT TGACCCGGCT ATACTGGAGC AATACAGTCA GGAAATAAAA
CAAGTCGTTG ACTTAGGTGT CGAAGTAGCC ATTGTAATTG GCGGGGGGAA CATCTTCCGT
GGGGTATCCG GTGAGCGTTC AGGAATCGAC CGGGTTCAGG GCGACTACAT GGGTATGCTG
GCAACTGTCA TCAATGCCAT GGCGCTTCAG AGTTCCTTCG AAAAGCACGG CATGTACACC
CGGGTGATGT CGGCCATTAA AATGGAGCAG GTTTGCGAAC CCTACGTGCG TCGGCGGGCG
GTGCGGCACC TCGAAAAAGG GCGGGTCGTA ATCTTCGCGG CCGGTACAGG AAGTCCCTAC
TTCACCACCG ACACCACGGC TAGTCTGCGG GCTATTGAAA TAGAGGCCGA TGTAGTGCTG
AAAGGGACTA AAGTCGACGG TGTGTACACC GCCGACCCCA TGAAAGACAA AACGGCTACC
CGGTATACCA CCATCACCTT CGAAGACGTT TACGAAAAGA AACTAAGCGT GATGGACTTA
ACAGCCTTTA CGCTCTGCCA GGAAAACAGC CTGCCCATTA TCGTTTTCAA CATGAACACA
AGGGGAAGTC TGCTCAAACT GGTACAGGGC GACGGCGATC AGGGTACGCT CATTACCATG
AAATTACCTG ACTAA
 
Protein sequence
MTSQTTYKRI LLKLSGEALA GPNGYNIDPA ILEQYSQEIK QVVDLGVEVA IVIGGGNIFR 
GVSGERSGID RVQGDYMGML ATVINAMALQ SSFEKHGMYT RVMSAIKMEQ VCEPYVRRRA
VRHLEKGRVV IFAAGTGSPY FTTDTTASLR AIEIEADVVL KGTKVDGVYT ADPMKDKTAT
RYTTITFEDV YEKKLSVMDL TAFTLCQENS LPIIVFNMNT RGSLLKLVQG DGDQGTLITM
KLPD