Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2378 |
Symbol | |
ID | 8726122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2867666 |
End bp | 2870338 |
Gene Length | 2673 bp |
Protein Length | 890 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | alanyl-tRNA synthetase |
Protein accession | YP_003387197 |
Protein GI | 284037267 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.188776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTCCC ACGAAATACG TCGGCATTTC CTCGACTTCT TCCAATCTAA ACAACACCTG ATTGTTGCCT CGGCACCGCT GGTCGCCAAA AACGACCCGA CGCTGATGTT CAACAATTCG GGAATGGCTC AATTTAAAGA TTTCTTTCTG GGCAACGGAA CGCCCCCGTC CAAGCGGGTG GCCGATACCC AGAAATGCCT GCGCGTATCG GGTAAGCATA ACGATCTGGA AGATGTTGGG TTCGATACCT ATCACCACAC CATGTTCGAA ATGCTGGGCA ACTGGTCGTT CGGCGATTAT TTCAAGAAAG AAGCCATTAC CTGGGCGTGG GAGTTGCTGA CGGAGGTCTA TAAACTGCCC AAAGACCGGC TGTATGTGTC GGTGTTTCAG GGCGATGCGA AAGATAATGT TCCCTTCGAT CAGGAAGCGT TCGACCTCTG GAAACCCATC GTGGGCGAAG ACCGGATCAT TTACGGCAAC AAAAAAGATA ACTTCTGGGA GATGGGTGAT ACGGGCCCAT GCGGTCCCTG CTCGGAGATT CACGTCGACT TGCGCACGCC TGAGGAAATC GCCGAAAAAC CCGGTAAGGA ACTGGTCAAT GCCGACCATC CGCAGGTTGT CGAAATCTGG AACCTCGTGT TCATGCAGTT TAACCGGAAA GCCGATGGCT CGCTGGAAGC ACTACCCGCC CGCCACGTCG ATACGGGCAT GGGTTTTGAG CGCCTGTGCA TGGCGATTCA GAATAAACGG TCAAACTACG ATACCGACGT ATTTACGGGC ACCATTAAGG TAATCGAAGA GATTTCAGGT ATCAGCTATA CCGCCGGTAC CGGCATGACG GACGTGGCCA TGCGCGTGAT TTCCGACCAT ATCCGGGCGG TATCCTTTGC CATTGCCGAC GGGCTGGTAC CCTCCAATGC CAAAGCCGGT TACGTAATCC GGCGGATTCT GCGCCGGGCT ATCCGGTACG GCTATTCGTA CCTGAACCTC GCCGAGCCGT TCATGACCAA ACTCGTGCCA ACGCTGGCCA TGCAGTTTGC CGATGTATTC CCTGAACTCA CTGCTCAGCG CGATTTTGTT GCTACCGTAA TTCGGGAAGA AGAGATTTCA TTTTTGCGAA CACTCGGAAC CGGACTGGGT CGCCTTGACC AGATCATCGG CCAGCTAACG ACCGATGGCA AGACGGAGAT TCCCGGTGAA ACGGTCTTTG AACTGAACGA TACCTTCGGC TTCCCCGCCG ATTTGACGGC TCTGATTGCC CGCGAAAAGC GTCTGACGAT TGATGAAGCC GGTTTCCAGA AAGCCTTGCA GGAGCAAAAA GCCCGGTCGC GGAAAGACGC GTCCTCGTCG GCCGGTGACT GGATTGACGT GAACGAAACC GACCGCGTTG AGTTTGTTGG CTACGACCAG CCCGAAGCGT ACGCTCAGAT TGTAAAGTAT CGTAAGATAC AAAACAAGCA GGGAACGCAG GTTCAGGTGG TGCTCGACAA GACGCCTTTC TACGCTGAAT CAGGTGGTCA GATTGGCGAT ACCGGTACGC TTGAACTGTT TTCGGGTTCC GACCAGATCG GTACACTGAC GGTACTGGAT ACAAAAAAAG AAAATGACCT GACCATCCAC ATTGTTCAGG ACGTTACGGG TATCGATGAT CTGCTCACCG AAGCGGATTC GGTCTATGCC GTAATTAACA CGACTCGCCG TGGTTTGACG AGCAGCAACC ACTCGGCTAC ACACCTGCTA CATGCCGCCC TGCGCGATGT ACTCGGCACG CACGTAGGCC AGAAAGGGTC GTATGTTGGT CCCGACGCGC TGCGTTTCGA CTTCTCGCAC TTCAGTAAAG TGACGGATGA ACAACTCGCT GAAGTAGAGC GCATTGTGAA CGAGAAAATC CGAGAGGATA TCAAACTCGA CGAGAAGCGG AACGTTCCCA TCGGTCAGGC TAAAGAATTA GGCGCAACAG CCTTGTTTGG TGAGAAATAT GGCGATTTCG TACGGGTCAT CACCTTCGAC CCCAACTATT CCGTTGAACT CTGCGGGGGC ACCCACGTAC CGGCAACTGG CCACATTGGC CTGTTCAAGT TCACGGGCGA AGGGTCGGTA TCGACGGGTA TTCGTCGGGT CGAGGCCAAA ACATCCGCTG GTGCCGAAGC ATTGGTGAAT GAGCAGATGG CCGTCGTTTC GGAGTTGAAG GAGTTGCTGA AAGCACCCAA AGACGTTGTG AAAGCGGTGC AGTCGCTACT GGACGAACGG GCTGCTTTAC AAAAACAGGT TGAAGCCTTG CAGAACGAGA AAGTTCAGCA GTTAAAAAAT CAGCTTCTGG ATAAAATTGA AACAGTGAAC CACAACGGCG GACCGGGCTA TTCCCGCCTG GTGGAACGCG TGGAGGTGCC CAACGCCGAT GCCCTTAAGC AACTGGCGTA CGACCTGAAG GCCAAAGTCG ATAATCTGGC CGTTGTACTG GGTGCCGACA TCAACGGCAA ACCCCAACTA GCGGTTATGC TGCCTGATTC ACTCATTCAG GACAAAAAAC TGAATGCCGG TCAGGTGGTG AAAGAGCTGG CGAAAAACAT CAAAGGTGGT GGCGGTGGTC AACCCTTCTT CGCCACAGCG GGCGGCACCG ACCTATCGGG ATTGGATGCG GCTCTGGCGC AGGGGAAGGA ATTACTGGGG TAA
|
Protein sequence | MTSHEIRRHF LDFFQSKQHL IVASAPLVAK NDPTLMFNNS GMAQFKDFFL GNGTPPSKRV ADTQKCLRVS GKHNDLEDVG FDTYHHTMFE MLGNWSFGDY FKKEAITWAW ELLTEVYKLP KDRLYVSVFQ GDAKDNVPFD QEAFDLWKPI VGEDRIIYGN KKDNFWEMGD TGPCGPCSEI HVDLRTPEEI AEKPGKELVN ADHPQVVEIW NLVFMQFNRK ADGSLEALPA RHVDTGMGFE RLCMAIQNKR SNYDTDVFTG TIKVIEEISG ISYTAGTGMT DVAMRVISDH IRAVSFAIAD GLVPSNAKAG YVIRRILRRA IRYGYSYLNL AEPFMTKLVP TLAMQFADVF PELTAQRDFV ATVIREEEIS FLRTLGTGLG RLDQIIGQLT TDGKTEIPGE TVFELNDTFG FPADLTALIA REKRLTIDEA GFQKALQEQK ARSRKDASSS AGDWIDVNET DRVEFVGYDQ PEAYAQIVKY RKIQNKQGTQ VQVVLDKTPF YAESGGQIGD TGTLELFSGS DQIGTLTVLD TKKENDLTIH IVQDVTGIDD LLTEADSVYA VINTTRRGLT SSNHSATHLL HAALRDVLGT HVGQKGSYVG PDALRFDFSH FSKVTDEQLA EVERIVNEKI REDIKLDEKR NVPIGQAKEL GATALFGEKY GDFVRVITFD PNYSVELCGG THVPATGHIG LFKFTGEGSV STGIRRVEAK TSAGAEALVN EQMAVVSELK ELLKAPKDVV KAVQSLLDER AALQKQVEAL QNEKVQQLKN QLLDKIETVN HNGGPGYSRL VERVEVPNAD ALKQLAYDLK AKVDNLAVVL GADINGKPQL AVMLPDSLIQ DKKLNAGQVV KELAKNIKGG GGGQPFFATA GGTDLSGLDA ALAQGKELLG
|
| |