Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2314 |
Symbol | |
ID | 8726057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2794623 |
End bp | 2795765 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | DoxX family protein |
Protein accession | YP_003387134 |
Protein GI | 284037204 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.024139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00460046 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGCAT CAACAGCGCA ACCTAAGGTT AAGACCGGCA CGCCCCCCAT GCTGATTGCC GCCCGTATCG CCCGTATTCT GGTCGGTATT GTTTTTATTT TTTCCGGGCT AATTAAACTG AATGATCCCG TAGGCACCCA GATCAAGTTT GAAGAGTACT TCGAGGTTTT CGCGCAGGAT TTACCGTTCA TGCACGATTT CTTCATGGCG CTGGTGCCGT TCACCCTGGC CATGTCGGTG CTGTTCTGCG CGGCCGAAGT GATCCTGGGC GTTGCGCTGC TGGCCTCCTA TAAACCCAAA GTCACCGTTT GGCTATTGTT CTTCCTGATT ACCTTTTTTA CGTTTCTGAC ATTTTATTCT GCCTATTTCG ACCGGGTAAC CGACTGCGGC TGCTTCGGAG ATGCCATAAA GCTAAAGCCC TGGACATCGT TTACGAAAGA CATTGTCCTG ATGGTACTCA TCTTATTTAT CATAGGCCAT CGCAATCGGC TTCGTTCCCG AAATACGGGC TGGTTGGTAG GTATCACCAT TGTACTGACC TTAGCGCTGG GTATTTACGC CGTTCAGTTT CTGCCACCAA TCGACATGCT ACCGTATGCG GTTGGTAAAA GCATTCCGGC CGGCATGAAG CCTTCCGAGC CAATGCGGTA CGAGTATGTG ATGGAGAAAG ATGGCAAGAC GGCCGAGTTT GAGCAGTACC CGACGGATCA GAGCTATAAA TTCAAAGAGA TGGTATTGGT GAACCCGAAC GCCAAACCTA AAATCACCGA TTACCGCATC TGGAATGACG AAGGGGACTT TACCCAGCAG ACCTTCGAGG GCAAAAAGCT GTTTATTATC GTAAAGAATA CGACAGATAT TGACGCAGGG AGTTTACCCG CCATTCGTGC TCTGGTTGAG GGCCTGAAAG GATCGGCCGT TACAGCTTAT ATCCTGACGT CTACCAGTGA TGATGAAATA AAGGCATTCC GCAAGGAATT TCAGCTCGAA ACGATTCCTT ACTATAAAGC CGATGCTACG GTTTTGAAGA CCATTATGCG CTCAAATCCC GGCACCTGGT TGCTGGATAA CGGTGTCGTA AAGGGCAAAT GGCACTTTAA TTCAACGCCC GACGCGGCAG AGGTAATTTC TTTAAGTAAA TAA
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Protein sequence | MNASTAQPKV KTGTPPMLIA ARIARILVGI VFIFSGLIKL NDPVGTQIKF EEYFEVFAQD LPFMHDFFMA LVPFTLAMSV LFCAAEVILG VALLASYKPK VTVWLLFFLI TFFTFLTFYS AYFDRVTDCG CFGDAIKLKP WTSFTKDIVL MVLILFIIGH RNRLRSRNTG WLVGITIVLT LALGIYAVQF LPPIDMLPYA VGKSIPAGMK PSEPMRYEYV MEKDGKTAEF EQYPTDQSYK FKEMVLVNPN AKPKITDYRI WNDEGDFTQQ TFEGKKLFII VKNTTDIDAG SLPAIRALVE GLKGSAVTAY ILTSTSDDEI KAFRKEFQLE TIPYYKADAT VLKTIMRSNP GTWLLDNGVV KGKWHFNSTP DAAEVISLSK
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