Gene Slin_2314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2314 
Symbol 
ID8726057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2794623 
End bp2795765 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content49% 
IMG OID 
ProductDoxX family protein 
Protein accessionYP_003387134 
Protein GI284037204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.024139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00460046 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCAT CAACAGCGCA ACCTAAGGTT AAGACCGGCA CGCCCCCCAT GCTGATTGCC 
GCCCGTATCG CCCGTATTCT GGTCGGTATT GTTTTTATTT TTTCCGGGCT AATTAAACTG
AATGATCCCG TAGGCACCCA GATCAAGTTT GAAGAGTACT TCGAGGTTTT CGCGCAGGAT
TTACCGTTCA TGCACGATTT CTTCATGGCG CTGGTGCCGT TCACCCTGGC CATGTCGGTG
CTGTTCTGCG CGGCCGAAGT GATCCTGGGC GTTGCGCTGC TGGCCTCCTA TAAACCCAAA
GTCACCGTTT GGCTATTGTT CTTCCTGATT ACCTTTTTTA CGTTTCTGAC ATTTTATTCT
GCCTATTTCG ACCGGGTAAC CGACTGCGGC TGCTTCGGAG ATGCCATAAA GCTAAAGCCC
TGGACATCGT TTACGAAAGA CATTGTCCTG ATGGTACTCA TCTTATTTAT CATAGGCCAT
CGCAATCGGC TTCGTTCCCG AAATACGGGC TGGTTGGTAG GTATCACCAT TGTACTGACC
TTAGCGCTGG GTATTTACGC CGTTCAGTTT CTGCCACCAA TCGACATGCT ACCGTATGCG
GTTGGTAAAA GCATTCCGGC CGGCATGAAG CCTTCCGAGC CAATGCGGTA CGAGTATGTG
ATGGAGAAAG ATGGCAAGAC GGCCGAGTTT GAGCAGTACC CGACGGATCA GAGCTATAAA
TTCAAAGAGA TGGTATTGGT GAACCCGAAC GCCAAACCTA AAATCACCGA TTACCGCATC
TGGAATGACG AAGGGGACTT TACCCAGCAG ACCTTCGAGG GCAAAAAGCT GTTTATTATC
GTAAAGAATA CGACAGATAT TGACGCAGGG AGTTTACCCG CCATTCGTGC TCTGGTTGAG
GGCCTGAAAG GATCGGCCGT TACAGCTTAT ATCCTGACGT CTACCAGTGA TGATGAAATA
AAGGCATTCC GCAAGGAATT TCAGCTCGAA ACGATTCCTT ACTATAAAGC CGATGCTACG
GTTTTGAAGA CCATTATGCG CTCAAATCCC GGCACCTGGT TGCTGGATAA CGGTGTCGTA
AAGGGCAAAT GGCACTTTAA TTCAACGCCC GACGCGGCAG AGGTAATTTC TTTAAGTAAA
TAA
 
Protein sequence
MNASTAQPKV KTGTPPMLIA ARIARILVGI VFIFSGLIKL NDPVGTQIKF EEYFEVFAQD 
LPFMHDFFMA LVPFTLAMSV LFCAAEVILG VALLASYKPK VTVWLLFFLI TFFTFLTFYS
AYFDRVTDCG CFGDAIKLKP WTSFTKDIVL MVLILFIIGH RNRLRSRNTG WLVGITIVLT
LALGIYAVQF LPPIDMLPYA VGKSIPAGMK PSEPMRYEYV MEKDGKTAEF EQYPTDQSYK
FKEMVLVNPN AKPKITDYRI WNDEGDFTQQ TFEGKKLFII VKNTTDIDAG SLPAIRALVE
GLKGSAVTAY ILTSTSDDEI KAFRKEFQLE TIPYYKADAT VLKTIMRSNP GTWLLDNGVV
KGKWHFNSTP DAAEVISLSK