Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2298 |
Symbol | |
ID | 8726041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2777999 |
End bp | 2778967 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003387118 |
Protein GI | 284037188 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.321032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000193345 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACCGTT TTAACACGCC CCTTTTTTTG CTACTGCTCC TTTCTTGTCT GAACGCCCTG GCACAAACTG AAGAGCCTCT ACAGTACAAA ATAACTGTTC CGACGGGTGC AGATCTAACC CTGGAGGGAA CGCTTACCAT TCCCGAAAAG GCGAAAAAAA CAATGCCGGT GGTGCTGCTT ATTGCCGGCT CTGGCCCAAC GGATCGGAAC GGGAATAACC CCTATGGTAT GAAACCGAAT ACTTACAAAA TGTTGGCCGA TAGCTTAGCC AGTAAAGGAA TTGCTGTAGC CAGATACGAC AAACGCGGAT CGGGTACAAA CTTACAGGCC GCTATAAAAA CGATTAAACC GGCAGAGCAT CGCTTTGATT TTTATGTGAG CGATGCTGTA GGTTTTATAA ACCAATTGAA GGCCGACAAA CGCTTTTCAA CGGTAGTTGT GGCGGGCCAC TCAGAGGGAT CATTAGTTGG AATGCTGGCC GCCGAAAAAA CAAAGTCCAG TAAATTTATA TCCCTGGCTG GTCCCGGTCG AAATATTGCA GATGTGCTGA AAGATCAATT AAAGGCGGGG CTACCGGACA CACTCAGTTC TGTTGCTGCT ACCATACTGG ATTCACTAAA GGCCGGTTAT AATGTGAAGC GAATAAATCC GTTTTTAATG GGCCTGTTTA ACCCAGGTAA CCAACCCGGA TTAATTTCAT GGATGGCGTA TAATCCTGCT TCAGTGATAA AGAATCTTAC GGGCCCCGTC TTAATCATTA ATGGGAAACA CGATAGTCAG GTGTCTACGA AAGAGGCCGA ACTACTCAAA GCTGCCAGAC CCGATGCTAC ATTAATTCTG GTTGAGGAAA TGAGTCATAT CCTGAAAAAT GCACCTCTTG ACCGGGCCGA GAATTTAAAA ACATATACCG ATCCTAATTT GACACTTACA CCAGGACTGG TAAATTATAT TGCAAAATTT GTGAAATAG
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Protein sequence | MNRFNTPLFL LLLLSCLNAL AQTEEPLQYK ITVPTGADLT LEGTLTIPEK AKKTMPVVLL IAGSGPTDRN GNNPYGMKPN TYKMLADSLA SKGIAVARYD KRGSGTNLQA AIKTIKPAEH RFDFYVSDAV GFINQLKADK RFSTVVVAGH SEGSLVGMLA AEKTKSSKFI SLAGPGRNIA DVLKDQLKAG LPDTLSSVAA TILDSLKAGY NVKRINPFLM GLFNPGNQPG LISWMAYNPA SVIKNLTGPV LIINGKHDSQ VSTKEAELLK AARPDATLIL VEEMSHILKN APLDRAENLK TYTDPNLTLT PGLVNYIAKF VK
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