Gene Slin_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2298 
Symbol 
ID8726041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2777999 
End bp2778967 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content45% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003387118 
Protein GI284037188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.321032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000193345 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACCGTT TTAACACGCC CCTTTTTTTG CTACTGCTCC TTTCTTGTCT GAACGCCCTG 
GCACAAACTG AAGAGCCTCT ACAGTACAAA ATAACTGTTC CGACGGGTGC AGATCTAACC
CTGGAGGGAA CGCTTACCAT TCCCGAAAAG GCGAAAAAAA CAATGCCGGT GGTGCTGCTT
ATTGCCGGCT CTGGCCCAAC GGATCGGAAC GGGAATAACC CCTATGGTAT GAAACCGAAT
ACTTACAAAA TGTTGGCCGA TAGCTTAGCC AGTAAAGGAA TTGCTGTAGC CAGATACGAC
AAACGCGGAT CGGGTACAAA CTTACAGGCC GCTATAAAAA CGATTAAACC GGCAGAGCAT
CGCTTTGATT TTTATGTGAG CGATGCTGTA GGTTTTATAA ACCAATTGAA GGCCGACAAA
CGCTTTTCAA CGGTAGTTGT GGCGGGCCAC TCAGAGGGAT CATTAGTTGG AATGCTGGCC
GCCGAAAAAA CAAAGTCCAG TAAATTTATA TCCCTGGCTG GTCCCGGTCG AAATATTGCA
GATGTGCTGA AAGATCAATT AAAGGCGGGG CTACCGGACA CACTCAGTTC TGTTGCTGCT
ACCATACTGG ATTCACTAAA GGCCGGTTAT AATGTGAAGC GAATAAATCC GTTTTTAATG
GGCCTGTTTA ACCCAGGTAA CCAACCCGGA TTAATTTCAT GGATGGCGTA TAATCCTGCT
TCAGTGATAA AGAATCTTAC GGGCCCCGTC TTAATCATTA ATGGGAAACA CGATAGTCAG
GTGTCTACGA AAGAGGCCGA ACTACTCAAA GCTGCCAGAC CCGATGCTAC ATTAATTCTG
GTTGAGGAAA TGAGTCATAT CCTGAAAAAT GCACCTCTTG ACCGGGCCGA GAATTTAAAA
ACATATACCG ATCCTAATTT GACACTTACA CCAGGACTGG TAAATTATAT TGCAAAATTT
GTGAAATAG
 
Protein sequence
MNRFNTPLFL LLLLSCLNAL AQTEEPLQYK ITVPTGADLT LEGTLTIPEK AKKTMPVVLL 
IAGSGPTDRN GNNPYGMKPN TYKMLADSLA SKGIAVARYD KRGSGTNLQA AIKTIKPAEH
RFDFYVSDAV GFINQLKADK RFSTVVVAGH SEGSLVGMLA AEKTKSSKFI SLAGPGRNIA
DVLKDQLKAG LPDTLSSVAA TILDSLKAGY NVKRINPFLM GLFNPGNQPG LISWMAYNPA
SVIKNLTGPV LIINGKHDSQ VSTKEAELLK AARPDATLIL VEEMSHILKN APLDRAENLK
TYTDPNLTLT PGLVNYIAKF VK