Gene Slin_2262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2262 
Symbol 
ID8726003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2742327 
End bp2743517 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387082 
Protein GI284037152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.237582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.287603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCTT TACCCGAACG GGTATACATA CGAAACCACC TGACCGACGA TGTCCGGACC 
TTATTACTAA AGACCGCGCC GGCTGGGATG GACATCAGGA AACTAGCGGT TCAGATAGCC
GCCCGGCAGA AAGCAAAAGA AAAACTACCT ACCTGGTACG CCAACGATGA CCTGGTCTTT
CCGCCGGGCC TTTCGGTTGA ACAGGCTTCT TCTGAGCAGA CGGCCCGCTA CAAAGCATCG
TTGGTGAGCG GGCATAAACT GCTGGACCTA ACCGGCGGGA TGGGTGTTGA TACCTGGGCT
TTCTCTGAAC GAATGGAACG GGTTCTCTAC GTAGAGCGTA ATCCCGAACT GGCAAGTCTG
GCCGCGCATA ACCTGCCACT TCTTGGCGCG ACCAATGTTA CCGTTCAAAC CGGCGACGGG
CTTTCATTAC TCACAGCATC AAACAACGCC CCCGCCGACT GGCTTTATCT GGACCCCCAC
CGACGGGACG AAGTGGGGGG CAAAGTTGTT CGGCTTCAGG ACTGCGAACC CGATATTACC
CGGCCCGAAA TACAACTGGC TTTACGAAAA ACATCGAAGC AGATTTTATT GAAAGCCTCC
CCCCTGCTCG ATATCGATCT GGCAATCCGT CAGTTGGAAA GCCCCGTGAA ATCCGTGCAT
ATCGTGGCCG TTGAGGGCGA AGTTAAAGAG GTATTATTTA TCATTGACAA TCAATCTGTT
AACATTAAAA AGATAGAAGT TAACGCCGTT AACCTATTAT CTGAGCGACG TATAGAATTT
AGTTTCAGTT GGGATGATGA ACGTTCGGTA GATGTTGCTT TCGGCGACCC TCAGACCTTC
CTGTACGAGC CCAATGCCGC CGTATTGAAA GCGGGTGCCT TTCGGCTGGT GGGGAACCGA
TTTGGTTTGA CAAAGCTGGC ACCTAACAGC CATCTGTACA CCAGCAGCGA ACTAAGAGAC
GATTTTCCGG GGCGTATTTT CAGACTTCAG CAGTTGATTA AACCCGATGC AAAAGCGCTC
AAACTGGCAG TACCTCTTCT AAAAGCAAAC CTGACGGTTC GAAACTTCCC GCAAACGGTA
GCCGAATTAA GGAAAAAATT ATCTTTACGC GAAGGAGGGG ACGTATACAT CCTTGCAACT
ACCCTTCTCA ACGGTGATAA GCGCCTGTTG ATAACCGAAA AAGTTGCCTG A
 
Protein sequence
MLSLPERVYI RNHLTDDVRT LLLKTAPAGM DIRKLAVQIA ARQKAKEKLP TWYANDDLVF 
PPGLSVEQAS SEQTARYKAS LVSGHKLLDL TGGMGVDTWA FSERMERVLY VERNPELASL
AAHNLPLLGA TNVTVQTGDG LSLLTASNNA PADWLYLDPH RRDEVGGKVV RLQDCEPDIT
RPEIQLALRK TSKQILLKAS PLLDIDLAIR QLESPVKSVH IVAVEGEVKE VLFIIDNQSV
NIKKIEVNAV NLLSERRIEF SFSWDDERSV DVAFGDPQTF LYEPNAAVLK AGAFRLVGNR
FGLTKLAPNS HLYTSSELRD DFPGRIFRLQ QLIKPDAKAL KLAVPLLKAN LTVRNFPQTV
AELRKKLSLR EGGDVYILAT TLLNGDKRLL ITEKVA