Gene Slin_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2250 
Symbol 
ID8725990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2721352 
End bp2722230 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content59% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003387070 
Protein GI284037140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCG AAACCGAGCC GGGCTTTTTT ATCCATGCCG ACGCCTGGGG TGACCCGCAG 
AACCCACCCG TTTTGCTCCT GCACGGGGGT GGCCAAACCC GGCACTCCTG GGGTGATACC
GCAACTGTAC TAGCCGACGC TGGCTGGTAT GCCGTAGCCC TCGATGCACG CGGTCATGGC
GACAGCGACT GGTCGGACAA GGCCCACTAC AGCATCGACT ACCTGGCAGA CGATCTCCGG
AAAATCTGTA CCACCTTCGA CCAGAAACCC GCGCTTGTTG GCGCATCCAT GGGCGGCATG
ACGGCCCTTG TTGCGGAAGG CGAACGGGGG CCATCCCACC CGGAGCCTAT TTGCTCCGCC
ATTGTGCTGG TCGATATTGC CCCGCGCAGT GAGCAAAAAG GTATCGAGCG TATTTTCGCT
TTTATGAGCC AGAATCTGGA CGGTTTTGCC ACCCTCGACG AAGCTGCCGA AGCCGTGGCC
GCTTACCTGC CCAACCGCCC ACGTCCGTCA GATAACAGCC GACTGGAGAA AAACCTGCGT
CTGCGTCCGG GACCCGATGG CGATCAGCGT TATTACTGGC ATTGGGACCC TACCATGCTG
GCGATCTGGC GGCACAGCAC CGGCCCGGAC AAACAAACGG GCAACGCAGA TCGATTGTAT
CAGGCGGCCC GCTCGCTAAC CGTTCCAACG CTGATCGTTC GCGGAGGCAT CAGCGATGTG
GTAAGCGAAA AGGTTATGAC CGAATTTCTG GACGCGGTTC CCCATGTTCA AAGCATCAGC
GTGGCCGACG CCGGGCATAT GGTGGCGGGC GACTCGAATC ATGCCTTTAC CAGAGCAGTA
ATTGATTTTT TAAGTGGCGT GAGTGAGGTA GGTAACTAG
 
Protein sequence
MKFETEPGFF IHADAWGDPQ NPPVLLLHGG GQTRHSWGDT ATVLADAGWY AVALDARGHG 
DSDWSDKAHY SIDYLADDLR KICTTFDQKP ALVGASMGGM TALVAEGERG PSHPEPICSA
IVLVDIAPRS EQKGIERIFA FMSQNLDGFA TLDEAAEAVA AYLPNRPRPS DNSRLEKNLR
LRPGPDGDQR YYWHWDPTML AIWRHSTGPD KQTGNADRLY QAARSLTVPT LIVRGGISDV
VSEKVMTEFL DAVPHVQSIS VADAGHMVAG DSNHAFTRAV IDFLSGVSEV GN