Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2234 |
Symbol | |
ID | 8725974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2705230 |
End bp | 2706036 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | hydrolase, TatD family |
Protein accession | YP_003387054 |
Protein GI | 284037124 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.154298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.291214 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTAA TCGACACCCA CGCTCACATA TATGACTCCC AGTTTGAAGA AGACAGGGAG GCAATGCTTC ATCAGGCGCA GCAAGAGCAG ATCAGTCAAA TCTGGATGCC GAATTGTGCC CGAGAAACCA TACCCGGCCT AATGGCTCTG GCCGAACAAT ACCCCGACCG GTGCCTGCCC ATGATGGGGT TGCATCCGGC TTATGTTAAC GACACCGTTG AGGAAGAACT GGCGGCTGTT GAGGAGGCTC TCAACCGAAA TGCCTTCATG GCCGTGGGCG AGATCGGTCT GGATTTCTAT TGGGATATGA CTTATGTCGA TCAGCAGTTT GCTGCCTTTG AAACCCAACT CCGATGGGCC GCTGAACAGC AGTTGCCGGT ATCCATGCAC ACCCGTTCGG GTCATGACCG AAATGCGTTT GCCGAAGCGG CTGACCTGAT CGAAAAACTG GCTCTTCCGG GATTGACCGG CATCTTTCAT TGCTTTGTCG GAATGCTGGA CGAAGCCAGC CGGGCCGTTG ACCTTGGCTT TAAGTTAGGC ATTGGCGGGG TGGCTACCTT CAAAAATGGC GGATTGGACA AGGTTCTCCC GCACATCGGT CTGGAGCATC TCGTCCTCGA AACCGACGCA CCCTATCTGG CGCCGGTGCC TTACCGTGGG AAACGCAACG AACCGGCTTA CATCCGGCTG GTAGCCCAGC GAGTGGCCGA CCTCAAGCAA ATCAATATCG ACGATGTAGC CCGGCACACA ACCGCTAACG CCCTTTCGCT GCTACCGGCC TTGTACGCCA ATCTTTTACC AGGATAG
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Protein sequence | MILIDTHAHI YDSQFEEDRE AMLHQAQQEQ ISQIWMPNCA RETIPGLMAL AEQYPDRCLP MMGLHPAYVN DTVEEELAAV EEALNRNAFM AVGEIGLDFY WDMTYVDQQF AAFETQLRWA AEQQLPVSMH TRSGHDRNAF AEAADLIEKL ALPGLTGIFH CFVGMLDEAS RAVDLGFKLG IGGVATFKNG GLDKVLPHIG LEHLVLETDA PYLAPVPYRG KRNEPAYIRL VAQRVADLKQ INIDDVARHT TANALSLLPA LYANLLPG
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