Gene Slin_2234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2234 
Symbol 
ID8725974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2705230 
End bp2706036 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content55% 
IMG OID 
Producthydrolase, TatD family 
Protein accessionYP_003387054 
Protein GI284037124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.154298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.291214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTAA TCGACACCCA CGCTCACATA TATGACTCCC AGTTTGAAGA AGACAGGGAG 
GCAATGCTTC ATCAGGCGCA GCAAGAGCAG ATCAGTCAAA TCTGGATGCC GAATTGTGCC
CGAGAAACCA TACCCGGCCT AATGGCTCTG GCCGAACAAT ACCCCGACCG GTGCCTGCCC
ATGATGGGGT TGCATCCGGC TTATGTTAAC GACACCGTTG AGGAAGAACT GGCGGCTGTT
GAGGAGGCTC TCAACCGAAA TGCCTTCATG GCCGTGGGCG AGATCGGTCT GGATTTCTAT
TGGGATATGA CTTATGTCGA TCAGCAGTTT GCTGCCTTTG AAACCCAACT CCGATGGGCC
GCTGAACAGC AGTTGCCGGT ATCCATGCAC ACCCGTTCGG GTCATGACCG AAATGCGTTT
GCCGAAGCGG CTGACCTGAT CGAAAAACTG GCTCTTCCGG GATTGACCGG CATCTTTCAT
TGCTTTGTCG GAATGCTGGA CGAAGCCAGC CGGGCCGTTG ACCTTGGCTT TAAGTTAGGC
ATTGGCGGGG TGGCTACCTT CAAAAATGGC GGATTGGACA AGGTTCTCCC GCACATCGGT
CTGGAGCATC TCGTCCTCGA AACCGACGCA CCCTATCTGG CGCCGGTGCC TTACCGTGGG
AAACGCAACG AACCGGCTTA CATCCGGCTG GTAGCCCAGC GAGTGGCCGA CCTCAAGCAA
ATCAATATCG ACGATGTAGC CCGGCACACA ACCGCTAACG CCCTTTCGCT GCTACCGGCC
TTGTACGCCA ATCTTTTACC AGGATAG
 
Protein sequence
MILIDTHAHI YDSQFEEDRE AMLHQAQQEQ ISQIWMPNCA RETIPGLMAL AEQYPDRCLP 
MMGLHPAYVN DTVEEELAAV EEALNRNAFM AVGEIGLDFY WDMTYVDQQF AAFETQLRWA
AEQQLPVSMH TRSGHDRNAF AEAADLIEKL ALPGLTGIFH CFVGMLDEAS RAVDLGFKLG
IGGVATFKNG GLDKVLPHIG LEHLVLETDA PYLAPVPYRG KRNEPAYIRL VAQRVADLKQ
INIDDVARHT TANALSLLPA LYANLLPG