Gene Slin_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2223 
Symbol 
ID8725961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2693262 
End bp2693837 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content45% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387044 
Protein GI284037114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.172855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCTA ACGATGAATT AATCCGAATC ATCGACTTAT TGAATACGAC GTATGAAGGT 
GAAGAAGCCT GGCATGGTCC TTCGGTAGTT GATGTCCTTC GGGGTGTAAC CCCAGATATG
GCCGGGCGAC GGATAGCGCC AAATACCCAC AGCATTGCTG AACTGGTTTT CCATATGACC
AGCTGGCGGA TATTCTGCGT CAAAAAAATG CAGGGCGATG AAACGTTTGA TATTACAACC
CCCGATAAAA ACTTCGGAGC GTTACCTGAT AAAATTGACG ATTTCGAATG GGAAGCTCTC
GAAATGGAGC TGAGTTTAAG TCAGGAAGAA CTCATCAACG AGCTCGATAA ACGAGATGAT
GATGAGTTTC TGGAAGACAT TGTACCGGGT CGGGACTATA CCTACTACGA TATGCTACAT
GGTATCATCA ACCATGATAT GTACCATACC GGCCAAATAA TGATCATACA AAAGGCCTTA
AGCTACAAAA GCGCGGGTTC CCGGTATGAA GATGACGATA TTGATGAATA TGGCTCGCCC
TTTGGTAGTG GCCATGAGCA CGACGATTAT TATTGA
 
Protein sequence
MIPNDELIRI IDLLNTTYEG EEAWHGPSVV DVLRGVTPDM AGRRIAPNTH SIAELVFHMT 
SWRIFCVKKM QGDETFDITT PDKNFGALPD KIDDFEWEAL EMELSLSQEE LINELDKRDD
DEFLEDIVPG RDYTYYDMLH GIINHDMYHT GQIMIIQKAL SYKSAGSRYE DDDIDEYGSP
FGSGHEHDDY Y