Gene Slin_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2218 
Symbol 
ID8725956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2687636 
End bp2688193 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content49% 
IMG OID 
Producttranslation initiation factor IF-3 
Protein accessionYP_003387039 
Protein GI284037109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0420504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAC CCCAGCGGAG ACCACCCCGT CGTGTGGTTG AAGAACCCTA TAAAGTTAAT 
GAGCGCATTC TGGCTCGCGA AGTGCGGGTA GTAGGCGAAA ATGTAGAGCA GGGAATCTAC
GAGACCAATA AAGCGCAGGC AATGGCCAAA GCGCAGAACC TCGACCTCGT AGAGGTGTCG
CCCAACGCGG TGCCGCCTGT CTGCCGTATT GTGGACTACT CCAAGTTCAA GTACGAGCAG
AAAAAGAAGC AGAAAGAAAT TAAGGCTAAT GCCACTAAAG TCGTCATCAA AGAAATACGA
TTCGGTCCGA ATACCGATGA CCACGACTTT GAGTTCAAAC TGAAGCACGC CATTAACTTC
CTGAAAGAAG GAGCAAAGGT AAAAGCCTAT GTGCAGTTCG TTGGCCGGGC CATCGTCTTC
AAAGACCGGG GCTTCCAACT GCTGGAACGC TTTTCCAAAG GGCTGGAAGA TTATGGCAAG
ATTGAAGCCG AACCAAAGCT GGAAGGTAAA CGAATGAGTA TGTTCCTTTC GCCAAAGGTA
GCGACGCCCA AAAAATAA
 
Protein sequence
MALPQRRPPR RVVEEPYKVN ERILAREVRV VGENVEQGIY ETNKAQAMAK AQNLDLVEVS 
PNAVPPVCRI VDYSKFKYEQ KKKQKEIKAN ATKVVIKEIR FGPNTDDHDF EFKLKHAINF
LKEGAKVKAY VQFVGRAIVF KDRGFQLLER FSKGLEDYGK IEAEPKLEGK RMSMFLSPKV
ATPKK