Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2197 |
Symbol | |
ID | 8725935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2662441 |
End bp | 2663217 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003387018 |
Protein GI | 284037088 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.205773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00799325 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGGAAG GATTAACCAA AGAGCAAATC GAACAATTTA TTCACATGGG TTTTGTGCGC CTGGATAACG CATTCTCTAA AGAGACTGCT CACCAGGTTA GGCATATCCT TTGGCAGGAT ATGCCAGTCG ACCCACAGGA TCCTACCAGT TGGACCAAGC CCGTTATTCG GCTAGGCATG TATACTCAGC CGCCCTTTGT TCGGGCGGCT AATACAGCCA GTTTGCACAA AGCATTCGAC CAATTGGTGG GACCGGGGCG TTGGATACCC CCTCAAAGTA TAGGCACTTT TCCTATTCGT TTTCCCTCGG ATGAACAACC CAATGATACG GGTTGGCATG TCGATGCTAG TTTTGCTGGA GCCGACCCCA CGAATTATTT GGAGTGGCGC ATTAATGTGC GCTCGAAAGG AAGGGGCTTG CTGATGTTAT TTCTTTTTTC GGACGTCACC CAGGCCGATG CGCCTACCTG CATTCGCATC GGCTCCCATC TGGAGGTAGC CCGCTTACTG TCCTCCGCAG GTGAAGAAGG ATTATCGTTC ATGGAGTTGG CTAGTAAACT GTCGGCATTG CCCAAAGGGG AGCCGATCAT TGCGACGGGT AAAGCGGGTA CGGTGTATCT ATGCCATCCC TTTTTGGCAC ATGCCGCCCA GGCGCATCGA GGCACTGAGC CCAGATTTTT AGCCCAGCCG CCCCTATTAC TACAGGATGA GTTAGTGCTT GTGGATTCGC CAAAAGGCTA TTGGCCTGTG GAAGCGGCCA TTCGTATGGC GCTGTAG
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Protein sequence | MQEGLTKEQI EQFIHMGFVR LDNAFSKETA HQVRHILWQD MPVDPQDPTS WTKPVIRLGM YTQPPFVRAA NTASLHKAFD QLVGPGRWIP PQSIGTFPIR FPSDEQPNDT GWHVDASFAG ADPTNYLEWR INVRSKGRGL LMLFLFSDVT QADAPTCIRI GSHLEVARLL SSAGEEGLSF MELASKLSAL PKGEPIIATG KAGTVYLCHP FLAHAAQAHR GTEPRFLAQP PLLLQDELVL VDSPKGYWPV EAAIRMAL
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