Gene Slin_2197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2197 
Symbol 
ID8725935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2662441 
End bp2663217 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387018 
Protein GI284037088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.205773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00799325 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGAAG GATTAACCAA AGAGCAAATC GAACAATTTA TTCACATGGG TTTTGTGCGC 
CTGGATAACG CATTCTCTAA AGAGACTGCT CACCAGGTTA GGCATATCCT TTGGCAGGAT
ATGCCAGTCG ACCCACAGGA TCCTACCAGT TGGACCAAGC CCGTTATTCG GCTAGGCATG
TATACTCAGC CGCCCTTTGT TCGGGCGGCT AATACAGCCA GTTTGCACAA AGCATTCGAC
CAATTGGTGG GACCGGGGCG TTGGATACCC CCTCAAAGTA TAGGCACTTT TCCTATTCGT
TTTCCCTCGG ATGAACAACC CAATGATACG GGTTGGCATG TCGATGCTAG TTTTGCTGGA
GCCGACCCCA CGAATTATTT GGAGTGGCGC ATTAATGTGC GCTCGAAAGG AAGGGGCTTG
CTGATGTTAT TTCTTTTTTC GGACGTCACC CAGGCCGATG CGCCTACCTG CATTCGCATC
GGCTCCCATC TGGAGGTAGC CCGCTTACTG TCCTCCGCAG GTGAAGAAGG ATTATCGTTC
ATGGAGTTGG CTAGTAAACT GTCGGCATTG CCCAAAGGGG AGCCGATCAT TGCGACGGGT
AAAGCGGGTA CGGTGTATCT ATGCCATCCC TTTTTGGCAC ATGCCGCCCA GGCGCATCGA
GGCACTGAGC CCAGATTTTT AGCCCAGCCG CCCCTATTAC TACAGGATGA GTTAGTGCTT
GTGGATTCGC CAAAAGGCTA TTGGCCTGTG GAAGCGGCCA TTCGTATGGC GCTGTAG
 
Protein sequence
MQEGLTKEQI EQFIHMGFVR LDNAFSKETA HQVRHILWQD MPVDPQDPTS WTKPVIRLGM 
YTQPPFVRAA NTASLHKAFD QLVGPGRWIP PQSIGTFPIR FPSDEQPNDT GWHVDASFAG
ADPTNYLEWR INVRSKGRGL LMLFLFSDVT QADAPTCIRI GSHLEVARLL SSAGEEGLSF
MELASKLSAL PKGEPIIATG KAGTVYLCHP FLAHAAQAHR GTEPRFLAQP PLLLQDELVL
VDSPKGYWPV EAAIRMAL