| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2134 |
|---|
| Symbol | |
|---|
| ID | 8725872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2588684 |
|---|
| End bp | 2589847 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | signal transduction histidine kinase, LytS |
|---|
| Protein accession | YP_003386963 |
|---|
| Protein GI | 284037033 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTATA AACTGTTTTT TTTGCAGGTG CTGGTTAGCC CTGCTATCCG TTTTCGTCTG
ATTCGTCATG CGTTATTGTG GATAACGGCC ATCCTGCTGG TTTATCGAGG CTTTCGATTT
ATCGCTACAT CCATACCCGA TACCTCTCCA CAAACAGCCC TACTCTATAG CTTGTCGTCA
ACAGCATTTG TCAGTACGTT AATTATCGGC ATCTACTGGC TTATTACGTG GCAAATTCAC
CAAAATTTAC TCCTCCGCTT TAAGCTCAAT TATTTTCTGC TGGCCATATT GGGCGTACAC
CTGGTGGCCG CTGAATTAGT CCTGGCTCAT TTTCGTCTCG TTTACGCGCT TTTTCCGCTT
ACCAAACTCC CCCGCTTTTA TGCGGCCCAC GCAGACCATA TCCAGCAGCT GCCCTTCTGG
CTGGCGCCCT TTGATGCCAT CATCGTCTGG CTGTTTTCCT TTTCGCTGGT GTACAATTAT
TTGCTCTATG CGATTGGACT AAAGGTGTTT AAAGACTTAT TCACCAGTCA GCTGCAACGT
GTTGAGCTGG AAAAGGAAAA TCTGCGATTG GAATTTGATT TCCTTAAAGC TCAGGTCAAT
CCTCACTTCC TGTTTAATAC GCTCAACAAT ATCTATTCGT TTGCCATTCG TTCGCCGGAG
CGGGTGGCTG GCTCGATCCT TAAGCTCTCG GACCTGATGC GCTATACCCT CTACGAAACC
AACGAAGAAC GGGTCCTGCT CAGTAAAGAG ATTGCCTTTC TGACCAGCTA TGTAGATCTG
GAACGAATTC GGCATGATGA CCATGTTTCC ATTCGCTTTT CCGTAACCGG AGAGTCAACC
AATCAGCAGG TGCCTCCGCT TCTGTTTATC AGCTTTATCG AAAATGCCTT CAAACATGGT
ATCCAGTCCA CGGCGCAGGC TTCCTGGGTC GACATCCAGC TCCATATCCA GCCGGCAGCC
GTTACCTTGT CGGTAGAAAA TAGCCGACCT GAACGAAAAG CTGCTGGGCC AGCTGGTATT
GGCCTGCTCA ACGTGCAAAA GAGACTCGCT TTTTATTATC CAAATTTGCA TACGCTGGAT
ATAGTGTCAA CCCCTGATCA GTTTTCTGTC CATCTATCTC TCCATCTTCA TGAAACCGAC
TTATCGCGTC ATTATCCTGG ATGA
|
|---|
| Protein sequence | MGYKLFFLQV LVSPAIRFRL IRHALLWITA ILLVYRGFRF IATSIPDTSP QTALLYSLSS
TAFVSTLIIG IYWLITWQIH QNLLLRFKLN YFLLAILGVH LVAAELVLAH FRLVYALFPL
TKLPRFYAAH ADHIQQLPFW LAPFDAIIVW LFSFSLVYNY LLYAIGLKVF KDLFTSQLQR
VELEKENLRL EFDFLKAQVN PHFLFNTLNN IYSFAIRSPE RVAGSILKLS DLMRYTLYET
NEERVLLSKE IAFLTSYVDL ERIRHDDHVS IRFSVTGEST NQQVPPLLFI SFIENAFKHG
IQSTAQASWV DIQLHIQPAA VTLSVENSRP ERKAAGPAGI GLLNVQKRLA FYYPNLHTLD
IVSTPDQFSV HLSLHLHETD LSRHYPG
|
|---|
| |