Gene Slin_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2117 
Symbol 
ID8725855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2560501 
End bp2560911 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386950 
Protein GI284037020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.169759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCG CAACACTCCC TCCACAAACA GCGGTATATA CCCCCTACAC CCTGATTGAT 
AAATCCCGTC AGGGCATGAT GCGCTCAGAG GCCGATCAGG TAGCTCAGTT AGCCAGCTTG
ACCGATGTTG AACTGGCTCG CATTTTGAAC ATGTCGATTC GAAACCTGCA CCGGCTCAAA
GCCGAGGATA AATTGACCCG GGATGCCTCC GAGCGGCTTC TCTTACTGAC CAATCTGTTA
CGACATGGTT TGGACGTCTT CGATGAGGAT GCCCAGACCC TGGCCGAGTG GCTTCGTTCT
CCTATTCGGG AACTCAATAC CCAATCGCCC TTATCTCTGC TCGATACAAC CACCGGGTTT
GGGCTAGTGG ACGATGTGTT GGGCCGCATC GAGCACGGTA TTGTCGGCTA A
 
Protein sequence
MAFATLPPQT AVYTPYTLID KSRQGMMRSE ADQVAQLASL TDVELARILN MSIRNLHRLK 
AEDKLTRDAS ERLLLLTNLL RHGLDVFDED AQTLAEWLRS PIRELNTQSP LSLLDTTTGF
GLVDDVLGRI EHGIVG