Gene Slin_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2089 
Symbol 
ID8725827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2520412 
End bp2521437 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content52% 
IMG OID 
Productpeptidase S41 
Protein accessionYP_003386927 
Protein GI284036997 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0444891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAC TACGTTTACC GCTCCTTTTG CTTTTTGTTC TCAACCTAAT GGCCTGCTCG 
TCCCAGTTAC TGGGTCCTCA GGTAACCAGC AACCCAGTTA GCAATTTTGA ACACCTTTGG
CAGGAATACG ACCGGCTGTA CGGGCCGATG GACGCTAAAA AAATTGACTG GAAACAGGTC
TATACCCAAT TCAGGCCCCA GGTCAGCAAC CAGATGACGG ACGCCGAACT GTATGCCGTT
ATGACCAACA TGCTGGATGT GCTTGACGAT AACCATGTCT ACCTGCGCCC TGTTGCCTCG
ACCCGTCTGC CCTGGTATAC CGGGGGTATT CTGGGCCGTA CGCCGGTGAG GGATTATGAC
GAAACGGTCG TCAAAAACTA CCTGACCGAG AGCCGCACGA TTACCCATGA ATTTGACTGC
GGAAAGCTAC CGGGTAATGT GGGCTATATC CTGCAAAAAG GCTTTGAGAA TGATTATTCA
ACCTATGAGA AAACCATGGA CTCAGTCCTG ACTTACATGA ACGACACCAG GGGACTTATC
ATTGACCTCC GTAATAACGG TGGAGGTGAG GACCGGGTGG CCCAGTATAT CGCCAACCGC
TTTGCTTCAC AACGGAGCCT TTCGTTTACG GCCCGGCTGC GAAACGGTCC CAACTACAGC
GACCTGGGAC CAGCACTACG CTTTTATACT GAACCAGCCG GGCGCTTTCA ATACCTTAAA
CCGGTTGTGG TGCTGACCAA TCGCTCCTCG TTTAGTTCGG CTGAAACCTT TCTGCTGGCG
ATGTTGCAGA ATAAACAGGT TGTCCAGGTG GGGGATGTGA CCGGCGGAGC CTTATCCGAT
GCCATTAGCC GTGAATTGCC TAACGGCTGG CTTTTCCGAG TCTCCATCGC CGATGTAAGG
GATGCATCCG GGCGAAACCT GGAGGGTCTC GGCATTGAGC CAACCTATAG AGTTAACAAC
CAGCCGGACG AACTAAAAGC CGGGCAGGAC AAGGCTCTCC AGAAGGCTAT TAGTCTGCTT
TTATAG
 
Protein sequence
MKRLRLPLLL LFVLNLMACS SQLLGPQVTS NPVSNFEHLW QEYDRLYGPM DAKKIDWKQV 
YTQFRPQVSN QMTDAELYAV MTNMLDVLDD NHVYLRPVAS TRLPWYTGGI LGRTPVRDYD
ETVVKNYLTE SRTITHEFDC GKLPGNVGYI LQKGFENDYS TYEKTMDSVL TYMNDTRGLI
IDLRNNGGGE DRVAQYIANR FASQRSLSFT ARLRNGPNYS DLGPALRFYT EPAGRFQYLK
PVVVLTNRSS FSSAETFLLA MLQNKQVVQV GDVTGGALSD AISRELPNGW LFRVSIADVR
DASGRNLEGL GIEPTYRVNN QPDELKAGQD KALQKAISLL L