| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2030 |
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| Symbol | |
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| ID | 8725768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2450836 |
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| End bp | 2453520 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003386874 |
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| Protein GI | 284036944 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0825092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAAA ACTTAGTCAT TGTGGAGTCG CCGGCAAAGG CAAAAACCAT AGAAGGCTAT
CTTGGAAAAG ACTTTACAGT GAAGTCCAGC TTCGGTCACG TTCGCGATTT ACCCAAAGAT
GGGTTAGCCG TTGACGTCAC CAATGGCTTC CGGCCGTCTT ACGAAATTTC GCCCGACAAG
AAGAAGCTAG TCAGTGAACT TAAGTCACTG GCCAAGTCGG CAGAAGAAGT ATGGCTGGCA
ACGGACGATG ACCGCGAAGG GGAAGCTATT TCGTGGCACC TGAAAGAAGC TCTCGGTCTG
CGCGACAACA CCAAACGGAT CGTCTTCCGC GAAATTACCA AGAATGCGAT TTTGAACGCC
ATCAAATCGC CCCGCACCAT TGATGTTGAT CTAGTGAACG CCCAGCAGGC CCGCCGGGTG
CTCGACCGTC TGGTTGGCTA CGAACTTTCG CCGGTTCTGT GGCGGAAGAT CAAAGGCGGC
AGTACAGGTC TGTCGGCTGG TCGGGTGCAG TCCGTTGCGT TGCGGCTCGT GGTCGAGCGC
GAACGGGAGA TCGACAAGCA CTCGGCTAAA TCGTCGTTTA AAGTGACGGC GCAGTTTATT
GTCGACGGCA ACAAAGTGCT GAACGCCGAA CTACCCAAGA ACTTCGCCAC GGCTGCTGAA
GCCCGGGCTT TTCTGGAAGC CTGCGTTGGG GCGACGTTTA CCATCAAAAA TCTGGAGACA
CGCCCTGCAA AGAAATCGCC CGCTCCGCCC TTCACGACCT CTACCCTGCA ACAGGAATCG
TCGCGCAAGC TGAGTTACTC GGTCGATCGT ACCATGCGGA TCGCCCAGAA CCTATACGAA
GCCGGTAAAA TTTCGTACAT GCGTACCGAC TCAACCAATC TTTCGCAGGA AGCCATTGAT
AAGGCTGTTG CGGAAATCGG CACTGAGTTT GGCGAAAAAT ACATCCAGAC CCGGCAGTTC
AAGACCAAGA ATGAATCGGC ACAGGAGGCC CACGAAGCCA TCCGTCCGAC AAACTTCAAC
GACCGAAGTG CCGGGGGCGA CCGCGACCAG AAGCGTTTGT ACGAACTGAT CTGGAAACGG
GCAATAGCCT CCCAAATGGC CGATGCACAG CTCGAACGGA CCACCGTAAC GATTGGCATA
CGCTTCGCCA ACGGCGCGAC TACCACCTTT CAAACGAACG TAGACGATAG CCCGTTTGTC
GAAACCCCTG AGGCTATAGC GCCAAACCGG TCATTCCCGA ACGAACTAGT GGCGCAGGGC
GAGGTTATCA AGTTTGACGG CTTCCTGCGC GTTTATCTGG AATCGAAAGA TGATGAGGAC
GACGAAGACG CCAAAGGCAT GCTGCCTCCG CTGAATATCG GCCAGGGGCT CAATCTGGGT
CAGATGAAAG CGACGGAGAA ATTTACCCGT CCGCAGCCTC GCTACGCCGA AGCATCGCTT
GTAAAGAAAC TGGAAGAAAT GGGCATCGGT CGTCCTTCAA CCTACGCACC GACTATTTCG
ACCATCGTCA ACCGGGGCTA CGTTACCAAA CAGGATAAGC CCGGCCAGGA ACGGAAATAT
ACGGAATACA CGCTGCAACA GAATCAGATC AGCGAAACCA GCGGAAAGGA AACCTACGGC
TCCGAAAAGG CCAAGCTCTT CCCGACCAAT ACCGGCATTG TTGTAAACGA CTTTCTGGTC
GAATACTTCC CCGACATCGT GGATTACAAA TTCACGGCTA CTGTTGAGAA GGAATTTGAT
GAGATTGCCG ATGGACGGAT GAACTGGCAA ACGATGCTTC AGGATTTCTA CGGCGATTTC
CATAAAAACA TCGAAGATAT TCAGGGCTCG TCGGTAGTCG CCTTTAAAAC CGGTGCCCGC
GATCTGGGCA TCGACCCCCG TTCGGGCAAG AAAATATCGG CCCGGCTGGG TAAATACGGT
GCTTATGCTC AAATCGGCGA ATCGACCGAC GACGAGAAGC CCCAGTATGC CAACCTGCGC
GATGGTCAAT TGATTGAAAC GATTACCTTG CAGGAAGCTC TCGATCTGTT CTCGCTGCCG
CGCGAAGTTG GTTTCTTCGA AGACAAACCG ATGACCATCG GAATCGGAAA ATTCGGGCCG
TATGTGAAGC ATGACGATAA ATACGTGTCG CTCACCAAAG AAGACGATCC CTACACGATT
GACGAAAGCC GGGCCATTCA GCTCATTCAG CAAAAACGAG CCGAAGCCGT TAGTGAAGCT
CTGGGCGAAT TTGAAGGCAA GATGGTATCG ACGGGCAAAG GACGATTTGG GCCGTATGTC
AAGTTTGAAG ACAAATACGT GTCGCTACCG CGCAACGAAT CCCTCGCCGG CTTGACCTTG
GAACGAGCCA TTGAACTGAT CCAGGCCAAG CGCGTTGTGG AAGCCAACAA ATACATTAAG
GAGTTCCCGG AGAATCCGGC CGTGAAGGTC ATCAACGGAC AATACGGACC TTATCTGGCT
ATCGGCAAAC GAAACGTCAA AATCCCGAAA GACGTGGACC CCGCTTCGCT AACCCTTGAG
GATTGCCTGA AACTGGGTGG TGACGAACCA GCCGCCAAGG CCCCGGCCAA GAAGGCTGCT
GCAACGAAAG CAACAGCCAC AAAGGCAGCG GCAAAACCAA AAGCAACGGC CACCGCGACC
AAAAAACCGG CCGCAACGGC GAAAAAGGCG GTCACGAAAA AATAA
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| Protein sequence | MSKNLVIVES PAKAKTIEGY LGKDFTVKSS FGHVRDLPKD GLAVDVTNGF RPSYEISPDK
KKLVSELKSL AKSAEEVWLA TDDDREGEAI SWHLKEALGL RDNTKRIVFR EITKNAILNA
IKSPRTIDVD LVNAQQARRV LDRLVGYELS PVLWRKIKGG STGLSAGRVQ SVALRLVVER
EREIDKHSAK SSFKVTAQFI VDGNKVLNAE LPKNFATAAE ARAFLEACVG ATFTIKNLET
RPAKKSPAPP FTTSTLQQES SRKLSYSVDR TMRIAQNLYE AGKISYMRTD STNLSQEAID
KAVAEIGTEF GEKYIQTRQF KTKNESAQEA HEAIRPTNFN DRSAGGDRDQ KRLYELIWKR
AIASQMADAQ LERTTVTIGI RFANGATTTF QTNVDDSPFV ETPEAIAPNR SFPNELVAQG
EVIKFDGFLR VYLESKDDED DEDAKGMLPP LNIGQGLNLG QMKATEKFTR PQPRYAEASL
VKKLEEMGIG RPSTYAPTIS TIVNRGYVTK QDKPGQERKY TEYTLQQNQI SETSGKETYG
SEKAKLFPTN TGIVVNDFLV EYFPDIVDYK FTATVEKEFD EIADGRMNWQ TMLQDFYGDF
HKNIEDIQGS SVVAFKTGAR DLGIDPRSGK KISARLGKYG AYAQIGESTD DEKPQYANLR
DGQLIETITL QEALDLFSLP REVGFFEDKP MTIGIGKFGP YVKHDDKYVS LTKEDDPYTI
DESRAIQLIQ QKRAEAVSEA LGEFEGKMVS TGKGRFGPYV KFEDKYVSLP RNESLAGLTL
ERAIELIQAK RVVEANKYIK EFPENPAVKV INGQYGPYLA IGKRNVKIPK DVDPASLTLE
DCLKLGGDEP AAKAPAKKAA ATKATATKAA AKPKATATAT KKPAATAKKA VTKK
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