Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2020 |
Symbol | |
ID | 8725758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2439888 |
End bp | 2440988 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_003386864 |
Protein GI | 284036934 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTAA AAGCCGACTA CCTGAAATAC ACGTTGCATT TTCGCTTCGA AGCGGGTACG TCACGCGGCA CCCTAACCGA AAAAACGTCT TATATAATCC GGCTTTCTGA CGATGAAAAT CCGACCGTTA TCGGGTACGG CGAATGCGGT CCGTTAAAAG GCCTCAGCTA CGACGACCGC CCCGATTTTG AAGAGTGTCT CCGTCAGTAT TGCGATGAGT TTACGGCCAT GGACCTTCAG CTGTTCAGCT GGAATGTCCC GATCATTCTC AACCAGGTCA TCAGCCCCCA GTTCCCGAGT ATTTTATTTG GTTTCGAAAC CGCAATGCTC GACTTTCTAA TGGGGGGAAA GCGGATCATT CGCCCGTCGG ACTTTATCAG TGGTCAGCGC AGCCTCCCCA TCAACGGACT CATCTGGATG GGGAGCCAGT CGTTTATGCG CCAGCAGATC GAAGAAAAAC TACTGGCGGG CTATACCACC CTGAAATTAA AGATCGGAGC TATCGACTTT AATCAGGAAT GCGACCTGCT CGCGATGATT CGGGAGCGTT TCCCCGCCGA TCAAATCACT CTGCGGGTCG ATGCCAACGG AGCCTTTGCG CCCGAGGAAG CGATGAAAAA ACTCGAACGG CTCGCAGGTT TTGACCTCCA TTCCATAGAG CAGCCCATTC GAAAAGGACA GCCCGATCTG CTGGCTGACC TGTGTAAACA TTCGCCCTTA CCCATTGCAC TGGATGAAGA GCTGATCGGA CAAATGGAGT ACGTTCATAA ATTCAGGTTA CTGAAAAAAA TCCAGCCTCA ATACATTGTC CTGAAACCTA CCCTGCTGGG TGGCCTACGG CATTGCGATG AGTGGATTGA ACTGGCTAAC CGACTTAACA TTGGCTGGTG GCTTACCTCG GCTCTGGAGT CGAATATCGG CCTGAACGCG GTGGCCCAGT ATACAGCCCA GTTTAAACAC CTGCTTCCTC AGGGGTTAGG CACCGGGCAA CTGTATCACA ACAATGTCGA TAGTCCTCTC GTTGTCGAAC ATGGGCAGCT ACGGTACGAC CTTAGCCGAA GCTGGAATTT AGGGCCCCTC TTTATGGATG CCTCTCACTA A
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Protein sequence | MSLKADYLKY TLHFRFEAGT SRGTLTEKTS YIIRLSDDEN PTVIGYGECG PLKGLSYDDR PDFEECLRQY CDEFTAMDLQ LFSWNVPIIL NQVISPQFPS ILFGFETAML DFLMGGKRII RPSDFISGQR SLPINGLIWM GSQSFMRQQI EEKLLAGYTT LKLKIGAIDF NQECDLLAMI RERFPADQIT LRVDANGAFA PEEAMKKLER LAGFDLHSIE QPIRKGQPDL LADLCKHSPL PIALDEELIG QMEYVHKFRL LKKIQPQYIV LKPTLLGGLR HCDEWIELAN RLNIGWWLTS ALESNIGLNA VAQYTAQFKH LLPQGLGTGQ LYHNNVDSPL VVEHGQLRYD LSRSWNLGPL FMDASH
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