Gene Slin_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2016 
Symbol 
ID8725754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2434038 
End bp2434676 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386860 
Protein GI284036930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0401161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA GAGATTCCCT TAAAGCCCTG TCGCTCACGG GTTTTGGCCT GGCTGTCAAT 
CCCGTTGAAG CGGCCGTTCC CGCGCCACCA GACGTTAAGC CGCTGAAAAT TCCCGGTGGC
CGACAGAAGT TCGAAGCCGA ACGGGACGCA CGACTGAACG CCGAGAAATT CTTTACCCCA
CACGAACTGC AAACGGTAAC GGTACTGTCC GATATCATTA TACCGGCTGA TGATCGGTCG
GGCAGTGCGT CGCAGGCGGG TGTTCCGGCC TTCATCGAAT TCATGATGAA AGACCAGCCC
AAAAACCAGA CGCCTATGCG GGGTGGCATC AAGTGGCTGG ACAACACCTG TACCAAGCGA
TACGGCAAAC CCTTCGTTCT GTGCACAAAA GCACAACAGA TTGACATGGT AGAGCAGATC
GCTTATCCGG GAAAAGCAAA GCCTGATATG ACACAGGGAG CCTCTTTTTT CAGCTTCATG
CGTAACCTCA CGGCTACCGG TTTTTACACC AGTCAGATGG GAATTAAAGA CATTGGCTAT
GTGGGTAACG TGCCGAACCA GTGGGATGGC GTTCCGGAGG ATGTCCTGAA GCAGTACGGA
CTCGCCTACG AGGAGCGAGA ACTGACACAA GGTAAGTAA
 
Protein sequence
MKRRDSLKAL SLTGFGLAVN PVEAAVPAPP DVKPLKIPGG RQKFEAERDA RLNAEKFFTP 
HELQTVTVLS DIIIPADDRS GSASQAGVPA FIEFMMKDQP KNQTPMRGGI KWLDNTCTKR
YGKPFVLCTK AQQIDMVEQI AYPGKAKPDM TQGASFFSFM RNLTATGFYT SQMGIKDIGY
VGNVPNQWDG VPEDVLKQYG LAYEERELTQ GK