Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2014 |
Symbol | |
ID | 8725752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2429925 |
End bp | 2431790 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | membrane protein insertase, YidC/Oxa1 family |
Protein accession | YP_003386858 |
Protein GI | 284036928 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.121616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGTA ATCAACTTAT TGGCATTGTC CTGATTCTGG CGATGCTGGT CGGATACCAG CTGCTGGTAC CGAAACCTGC GCCCGAAAAA CAGGCTGCTC AACAAACACA ACCAACAAAA CCCACCACTG CCTCCGGGGT TGCTGCTACG GATACAGGTG CAGCCAATAG CGCTCAACAA ACTCCTGACT CGGCTGCCTT AACGGCTAAA TTTGGTGATT TCGCAACGGT TGCCACCGGC CAGGCCCGTG ATATTGTCGT TGAAAATAAC GATATCAAAG TAACCTTTAC TACGCAGGGC GGTCGGGTGA AGGAGGTTGT CCTGAAGAAG TACAAAACTT TTGATCAGAA GCCACTCGTT CTGATTGACG AGAAAAGCAG TCAAACCCTT CTTGAACTCC CTACAAATCA GGGTAAGGTT GATTTACACA AGCTATACTA TCAGACAACA GCGCAAGGTG GTACGGTTAG TGGTCAGGCG CAGCAGCTTG TTTTTCGGGC AGAAGTAGCG CCGGGGCAGT CTGTTGAACA GGTGTACACG ATTCCGGCCG AGGGGTATGT ACTCGACTAT GACCTTAAAC TGAACGGTCT GTCAAATGCG ATCGGTACTG GCGATATCCG GTTCTTCTGG CAGGATAAAA TGCGGCAGTA TGAAAATGAC CTGTCCAACA ACCGCCGGGC TGCTACCATC AATTACCTGA CGGCCGACGA AGATTTCGAG AAATTAACCG AAGGCGAAAG TAACCAGGAA GCAACTGTTG AAGAACCCGT GCAGTGGTTT ACCATCAAGC ATAAATACTT TCTGTCGGGT TTTGTTGCCA GAAACAGCCC GCTGACTAAG GCAAATTTTA AAGCACTGGT CAATCCGGCC GACAGTAGCG TCGTAAAAAC AGCCATTGCC GATGTAACCC TGCCCATTGC CGATGTAAAA GCCGGAAAAG GACAGTATAA ACTCTTCTAC GGACCCAATG ATTTTCAGTT GCTGGGAAGT GTAGCCCCCG AATTTGATCA GAATGTATAC CTTGGGTACT CCATCCTGAA GCCAATCAAC AAGTACTTCT TCGTGCCAGT ATTCAATTTC CTGGAGAAGT TCATTGCCAA CTATGGCTTA CTAATTATTG CGCTGGTGGT GTTTGTGAAA TTAATTCTAA CACCGTTAAC CTACAAGTCA TACATCAGTA TGGCCAAAAT GCGGGTTCTT CAGCCGGAAT TGAACGAGAT GAAGGAGCGG GTTGGTGACG ACATGGCGAA GCAACAGTCT GAGCAAATGA AATTGTATCA GGAAGTGGGC GTTAGTCCGC TGAGTGGCTG CGTTCCGGTA CTGGCTACCA TGCCGATTCT GTTCTCGCTG TTCATGCTCT TCCCGAATTT GATCGAGCTG CGCCAGAAAT CGTTCCTGTG GGCCAATGAC CTTTCGACCT ACGATGCGTT CATTACCTTC CCGACCTTAC CCTTTATTGG CAGTCACCTG AGCTTGTTTA CGGTACTGAT GACGATTTCG TCCATTGCGT ACGCGTATTA TAATAACCAG ACAACACCAA CGCAGCCGGG GCCCGTGAAC ATGAAAGCCA TGAGCTATGT ATTCCCGCTT ATGTTCATGT TCGTTCTGAA CTCGTATCCG GCTGGTCTGA CGTTTTATTA CTTTGTATCG AACGTTGTAA CGATTGCTCA GCAACAACTG ATCCGCCGGT TTGTTGATGA AGATAAGATC AAAGCTGTTC TGGACGAAAA CCGTCGTAAG AACGCAGCCG GAGAAGGCAA GAAGCCCGGC GGATTCCAGG CGCTGTTGCA AAAACAGTTA GCTGCCGCCG AAGAGGCCCG TAAGCAGGCT GACGAAGCCC AGCGCCGAGC AAAGTCTAAG AAGTAA
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Protein sequence | MDRNQLIGIV LILAMLVGYQ LLVPKPAPEK QAAQQTQPTK PTTASGVAAT DTGAANSAQQ TPDSAALTAK FGDFATVATG QARDIVVENN DIKVTFTTQG GRVKEVVLKK YKTFDQKPLV LIDEKSSQTL LELPTNQGKV DLHKLYYQTT AQGGTVSGQA QQLVFRAEVA PGQSVEQVYT IPAEGYVLDY DLKLNGLSNA IGTGDIRFFW QDKMRQYEND LSNNRRAATI NYLTADEDFE KLTEGESNQE ATVEEPVQWF TIKHKYFLSG FVARNSPLTK ANFKALVNPA DSSVVKTAIA DVTLPIADVK AGKGQYKLFY GPNDFQLLGS VAPEFDQNVY LGYSILKPIN KYFFVPVFNF LEKFIANYGL LIIALVVFVK LILTPLTYKS YISMAKMRVL QPELNEMKER VGDDMAKQQS EQMKLYQEVG VSPLSGCVPV LATMPILFSL FMLFPNLIEL RQKSFLWAND LSTYDAFITF PTLPFIGSHL SLFTVLMTIS SIAYAYYNNQ TTPTQPGPVN MKAMSYVFPL MFMFVLNSYP AGLTFYYFVS NVVTIAQQQL IRRFVDEDKI KAVLDENRRK NAAGEGKKPG GFQALLQKQL AAAEEARKQA DEAQRRAKSK K
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