Gene Slin_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2004 
Symbol 
ID8725742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2421033 
End bp2421416 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386848 
Protein GI284036918 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.888626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.327416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTATTC CAGATCGTAT AGCGCTTGTA TTTTCAGCCC TGAAAGGGGT TCCGGCCACG 
CGTTTCTTTG AAATTGCGGA ACTGACCGGC TATAAGCGCG AGCAATTGGC CGAAGTTTTC
GATACGTCTC TCAAAACATT TCAGCGCTAC GAACGGGAGA AAAAAAGTCT CAATCCGCAG
GATAGCGAGA AAGTACTCAA AATTATGGCC TTGTTTCAAA CCGGCGAATC CGTATTTGGA
ACAGCTGATT CTTTTCGTCG CTGGATGGAC AAGCCAGCCT ACGGATTAGG GAATCAGATT
CCATTTGACT TGCTGCATAC CTCAGGGGGA ATCGACCTGG TGATGGATGA AGTCACCCGG
ATTGAATACG GTGACCTGGC CTGA
 
Protein sequence
MVIPDRIALV FSALKGVPAT RFFEIAELTG YKREQLAEVF DTSLKTFQRY EREKKSLNPQ 
DSEKVLKIMA LFQTGESVFG TADSFRRWMD KPAYGLGNQI PFDLLHTSGG IDLVMDEVTR
IEYGDLA