Gene Slin_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1993 
Symbol 
ID8725731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2406922 
End bp2407329 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content49% 
IMG OID 
Productresponse regulator receiver protein 
Protein accessionYP_003386837 
Protein GI284036907 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.156439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00339677 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCAGAC CCATTCACTG TATCCTGTTA ATTGACGACG ACCCCGACGA TAATTTTCTT 
CATCGGCTTG TCATCGACGA ATCCAATCAG TGCGATACCG TTCGAATAGT AAACAGCGGC
ATGCAGGCGC TTACCTACCT GATCCAAACC GATCATCCCG ATTATATCCG CCCCGATGTC
GTTTTCGTTG ATATAAACAT GCCCGGCATG AATGGATTCG AGTTTCTGGA AGAGTACCAA
AAACTCGATA CGCAACTCAA AGGGCAAGTG GTTGTCGTAA TGCTAACGAC TTCGATCAGT
TTTGTGGACC GGCAGCGGGC GGGTTCCCTG CCAGAAATCA ATGTCTACCG GACTAAGCCT
CTAACGATCG CCATGATCAG CGAACTGGTC GATGCGTATT TTTCCTAA
 
Protein sequence
MPRPIHCILL IDDDPDDNFL HRLVIDESNQ CDTVRIVNSG MQALTYLIQT DHPDYIRPDV 
VFVDINMPGM NGFEFLEEYQ KLDTQLKGQV VVVMLTTSIS FVDRQRAGSL PEINVYRTKP
LTIAMISELV DAYFS